Pseudobacter ginsenosidimutans: FSB84_15205
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Entry
FSB84_15205 CDS
T06126
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FSB84_15205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgo03400
]
FSB84_15205
DNA repair and recombination proteins [BR:
pgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FSB84_15205
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_29
APS_kinase
AAA_27
ABC_ATPase
AAA_14
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QEC42971
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Position
3771622..3772917
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AA seq
431 aa
AA seq
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MYLLTDEQTIEDLRIFGKRDSQGLFDLYNHSHTRGAEAVLKEMFTKPLSDQQEINRRSNI
IQHFAGMDMRFPFEAALFDMAEKYLISADEQKKQGSQHAILSEREISNGVTSLISLVQQV
KTFVETKAVAMIDGYSERGTIVSLLLDPAFEPVLREQQNAKLSYAAITAYDLLFRNRERG
KIEQLLKQIYLLDVYLSVAKVARERNFVFPKALEKGKCTLRLKAVYHPELAKPVSNDFSM
DTTRNVLFLTGANMAGKSTFLRAVSTAVYVAHIGFPVAAAEMEFSVLDGIYTTINLPDNL
GIGASHFYAEVLRVKKVAAELQASKSLFIIFDEMFRGTNVKDAHEATVEITTAFAAKRNS
MFIISSHIVEAGDQLNKIPSIGFQYLPTRMNGNIPEYTYTLEHGVTADRHGMIIIRNEGI
LDTLKNGKKIV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgttaaccgatgaacaaacgatcgaagacctgcggatcttcggcaagcgagac
agccagggattgttcgatctatacaatcattcacatacccgcggcgcagaagctgtattg
aaagaaatgttcaccaaaccactgagtgatcagcaggagatcaaccgaagaagcaatatc
atccaacatttcgcaggcatggatatgcgctttccatttgaagccgccttgtttgatatg
gcagagaaatacctgatctcggcagatgaacaaaagaagcagggaagccagcatgctata
ctcagcgaacgggagatcagcaatggtgtgacttcgctgatcagcctggtgcaacaagtc
aaaactttcgttgaaacgaaagccgtagccatgattgacggatattcagagagggggacg
atcgtctccctcctccttgatcctgcatttgaaccagtacttcgtgagcagcaaaatgcg
aaactttcttatgccgccatcactgcttacgatcttcttttcagaaatcgcgaacgagga
aagattgaacaactgctgaagcagatctatctgctggatgtatacctgtctgtagccaaa
gtggctcgtgaaaggaatttcgtatttcccaaagcgttagaaaaaggaaaatgtaccctc
cggctcaaagctgtttatcaccctgagctggcaaagcctgtgagcaatgatttttcgatg
gatactacccggaatgttctatttctgacaggggcgaatatggccggcaagtcaaccttt
ctccgcgctgtgagcacagcagtgtatgtggcgcatatcgggttcccggtggcagcagca
gagatggagttctctgtattggatggcatttacactaccatcaacctgccggataatctc
ggcattggcgccagccatttctatgcagaagtgttaagagtgaaaaaggtagctgctgaa
ctgcaggccagcaaatcgctcttcatcatcttcgatgaaatgttccggggcaccaatgta
aaggatgcacatgaagctacagtagagatcaccactgcatttgctgcaaagaggaatagt
atgttcatcatctcttcacatattgtggaggctggcgatcagttgaataaaattccttct
atcgggtttcaataccttcctacgcgtatgaatggaaatattcccgaatatacgtatacg
ttggagcatggtgttacagcagaccgccatggcatgatcatcatccgcaatgaaggcatc
ctggatactttaaaaaatggaaagaaaattgtttaa
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