KEGG   Paraburkholderia graminis: CUJ91_13875
Entry
CUJ91_13875       CDS       T05548                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pgp  Paraburkholderia graminis
Pathway
pgp00740  Riboflavin metabolism
pgp01100  Metabolic pathways
pgp01110  Biosynthesis of secondary metabolites
pgp01240  Biosynthesis of cofactors
pgp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pgp00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CUJ91_13875 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CUJ91_13875 (ribD)
Enzymes [BR:pgp01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CUJ91_13875 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CUJ91_13875 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD APOBEC3
Other DBs
NCBI-ProteinID: AXF08876
LinkDB
Position
PHS1_A:3124357..3125514
AA seq 385 aa
MFSQTDFVHMERALALARRGMYTTDPNPRVGCVIVKNGEVIGEGFTQPAGQDHAEIRAMK
DARSRGHDLRGATAYVTLEPCSHFGRTPPCANALIEAQVARVVAAMEDPNPQVSGRGLAI
LRDAGIEVRCGLLANEAHELNIGFVSRMTRGRPWVRMKVAASLDGRTGLPSGVSQWITGE
AARADGHAWRARASAILTGIGTVREDDPRMTVRAVDTPRQPQRVLIDSQLEVSPHAQILA
GAPTLIFCGNLDERHRERAEALRERGAEIVQMANAAGKVDLPGMLKVLGERQVNELHVEA
GYKLNGSLLREGCVDELLVYLAPSLLGIDSMSMFNLGAPETLEGRVKLAFHNVERIGEDL
RILARLVPAGATASDTDAASPPVSF
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgttctcgcaaaccgacttcgtccacatggaacgtgcgctcgcgctggccaggcgcggc
atgtacacgaccgacccgaatccgcgcgtgggttgcgtgatcgtcaagaacggcgaagtc
atcggcgaaggattcacgcagccggccggccaggaccacgctgaaatccgtgcgatgaaa
gacgcgcgttcgcgcggtcacgatctgcgcggcgcgaccgcttacgtcacgctcgagccg
tgcagccattttggtcgcacgccgccttgcgcgaacgcgctaatcgaagcgcaggtcgcg
cgcgtggtcgccgcgatggaagacccgaatccgcaggtgtcgggacgcggcctcgcgatt
ttgcgcgatgcgggcatcgaggtgcgctgcggcctgctcgcgaacgaagcgcatgagttg
aacatcggcttcgtgtcgcgcatgacgcgcggccggccgtgggtgcgcatgaaagtagcg
gcctcgctcgacggccgcaccggcttgccttccggcgtcagccagtggatcaccggcgaa
gcggcgcgggccgacggccatgcatggcgtgcgcgcgcatcggcgattctgaccggcatc
ggcaccgtcagggaagacgatccgcgtatgacggtgcgtgccgtcgacacgccccgccag
ccgcaacgcgtgctgatcgacagtcagctggaggtctcgccgcacgcgcagattctcgcc
ggcgcgccgacgctgattttctgcggcaacctggatgaacggcatcgcgaacgcgcagag
gcgctgcgcgagcgcggcgcggagatcgtccagatggccaacgcagccggcaaggtcgat
ctgcccggcatgctgaaagtgcttggcgagcgccaggtgaacgaactgcacgtcgaggca
ggctacaagctgaacggctcgctgctgcgcgaaggctgcgtcgacgaactgctcgtgtat
ctcgcgccgagcctgctcggcatcgactccatgagcatgttcaatctgggcgcgcccgaa
accctggaaggccgcgtcaagctggcgtttcacaacgtcgagcggatcggcgaggacctg
cggattctcgcgcgcctcgtgcccgccggcgccacggcaagcgacaccgacgccgcgtcc
ccacccgtttcgttttga

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