Puccinia graminis: PGTG_08376
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Entry
PGTG_08376 CDS
T02226
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
pgr
Puccinia graminis
Pathway
pgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGTG_08376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_08376
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PGTG_08376
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
PGTG_08376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
10529799
NCBI-ProteinID:
XP_003326839
UniProt:
E3KDI4
LinkDB
All DBs
AA seq
352 aa
AA seq
DB search
MIITGQSIFTITHERAPTKEIPLDCSGSGFDQPALVVPGEMIASSKYWMRGHGTFIEEQS
EEQEGGELDGETQTSEGLIRSSLAGTVERINKLITVIPLSGRYRPEVGDLVIGRITEVQS
KRWKVEAGGRQHAVLMLGSVNLPGGVQRRKLESDELQMRFFFQEGDLLVAEVQGFFGDGS
MSLHTRSRKYGKLRNGMLLKVPSQLILRLKSHFHILPIGIDLIIGVNGWIWIAQQRAHTE
LDESLKEAFEAEADNMYSDVNEPISTKTRANIARLAGAINLLSTHSIPISDSSILRTYQA
SLEISRLSRLDDDQPMDVDGSEDPSLAAKHELDGFLKPEFREKVLALLVASS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcaccggccaatcgatattcaccatcacccacgagcgagcaccgacgaaggag
atcccgctggactgctcaggatcgggcttcgatcagccagccctggtcgtcccgggcgag
atgatcgcctcgtcgaagtactggatgcgcggccatgggacgtttatcgaggagcagtcg
gaggagcaggagggcggcgagctcgacggagagacacagacttccgagggactgattcgg
agcagtcttgccgggacggtcgaacggatcaacaaactgatcaccgtcatccctcttagc
ggccggtaccgtcctgaagtgggcgatttggtcatcggaagaatcaccgaagtccaatcc
aaacgatggaaagtcgaggctggcggccgtcaacatgcggtactgatgctgggatccgtc
aatctcccgggcggcgtccagcgaagaaaactggaatccgatgagcttcagatgcgcttc
ttcttccaagagggcgacctattggtcgcagaagtgcaagggttttttggcgatggatcg
atgagcttgcacacacgttccaggaagtatgggaagctacgaaacggaatgctcttgaaa
gtgccttcgcaattgatcctacgcctcaagtcgcatttccacatcttaccgatcgggatc
gacctgatcatcggcgtgaatggctggatatggattgcccaacaacgggcgcacacggag
ctcgacgagtcactcaaagaggccttcgaagcagaagctgataacatgtactctgatgtc
aacgagccgatctcgaccaagactcgagcaaacatagcccgtctagcaggcgcaatcaat
ctgctctcgacccattcgatcccgatctccgattcgtcgatcctgcggacctaccaagcc
agcttagagatctcgcgtctatccaggctggacgacgatcaaccgatggacgtcgatggc
tccgaggaccctagtctggccgcaaaacatgagctcgacgggttcttgaaacccgagttc
agggagaaggtcttggcccttctcgttgcttcttcgtag
DBGET
integrated database retrieval system
