Puccinia graminis: PGTG_11678
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Entry
PGTG_11678 CDS
T02226
Name
(RefSeq) DNA polymerase delta subunit 1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pgr
Puccinia graminis
Pathway
pgr03030
DNA replication
pgr03410
Base excision repair
pgr03420
Nucleotide excision repair
pgr03430
Mismatch repair
pgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGTG_11678
03410 Base excision repair
PGTG_11678
03420 Nucleotide excision repair
PGTG_11678
03430 Mismatch repair
PGTG_11678
03440 Homologous recombination
PGTG_11678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgr03032
]
PGTG_11678
03400 DNA repair and recombination proteins [BR:
pgr03400
]
PGTG_11678
Enzymes [BR:
pgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGTG_11678
DNA replication proteins [BR:
pgr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
PGTG_11678
DNA repair and recombination proteins [BR:
pgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
PGTG_11678
MMR (mismatch excision repair)
DNA polymerase delta complex
PGTG_11678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_exo2
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
10539921
NCBI-ProteinID:
XP_003330341
UniProt:
E3KNP7
LinkDB
All DBs
AA seq
1055 aa
AA seq
DB search
MDSGQSKKRKSMANGPDQTASRTRVRVEENGSTKDEPVDDALLAIPLDAHGSLEYGSNWA
RPTLSPINPQNTAIIFQQIDIDEQSQSNVPRLRIFGVTEAGHSVLVHIQDFLPYFWVPAP
KGFQNTDCRELLTTLNSALSLGVKPVHSLSVAYKTSLWGYTGDTQSPFLKIVLTDFKHLG
RVKNAFERGEVNFREMFTACTTFESNIAYTLRFMIDKKVTGMNWLEVPPGSYRLRTELEK
ASNCQIELETSAETLISHAPEGEWSKMAPFRVLSYDIECSGRKGVFPDARLDPVIQIANM
VTAHGSTVPFIRNVFTLNTCSHIAGSQVLEFKSEDQLLAKWQAFVAECDPDLVIGYNTSN
FDMPYLLDRAKALKVASFPYLGRMRNSQTAVKETHFSSKAYGTRDSKETHLDGRLQLDLL
QVMQRDYKLRSYTLNSVCAHFLGEQKEDVHHSIITDLQNGSAETRRRLAVYCLKDAYLPQ
RLMDKLMCFVNYTEMARVTGVPFNYLLSRGQQIKVVSQLYRRANEHSYLVPALKHEGSDE
PYDGATVMEPVRGFYDVPIATLDFASLYPSIMMAHNLCYTTLTDAKTVKLLELRQDEDFI
ITPNGDYFVKASKRKGLLAIVLEDLLSARKRARAELKLETDPFKRAVLDGRQLALKISAN
SVYGFTGATVGKLPCLPISMSVTAFGREMIKITKNEVELKYTKANGYDDDAEVIYGDTDS
VMVKFGCAEAADFVSAKFQKPIKLEFEKVYFPYLLISKKRYAGLHWTKLEKHDKMDAKGI
ETVRRDNCPLVSTVIETCLKKMLIDRDVKGAEAYTKQVISDLLQNRIDLSQLVITKALAK
ADYAAKQAHVELAKRMKKRDAGSAPALGDRVAYVIIKGTKDARAYEKSEDPLYVLENNIP
IDTKYYLDNQLSKPLMRIFEPILGEKSSSLLAGDHTRIVSIATPTQGGLMGFIKRTETCL
GCRVPLGKTTKDTNTAVCKNCRPKTAALYSKQMALTQGFENAFARLWTQCQRCQGSLHQE
VICTASDCPIFYMRTKSRKDVEDSYAVLQRFDGAW
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggactcaggccagtcgaagaaacggaagtcgatggccaacggacccgaccagacggcc
tcccggacccgcgtcagagtcgaggagaatggcagtaccaaggacgagcctgtggatgat
gccctgcttgccatccctctggatgctcatggatctctggaatacggctccaactgggcc
cggcctacgttgagtccaatcaacccccaaaacactgcgatcatttttcaacagatcgat
atcgacgagcaatcccagagcaatgtccctcggctccgaatcttcggcgtcaccgaagca
ggccactcagtcctcgtccacatccaagacttcttgccttatttctgggtcccagctccg
aaagggttccagaacactgactgtcgggaattgctgaccacattaaactccgccctctcg
ctcggtgtcaagcctgtccatagtctctcagtggcttacaagacctccctgtggggatac
actggggacacccagtctccgttcttgaagatcgtcctgacagacttcaaacatcttggt
cgggtcaaaaatgctttcgaaagaggagaagtcaacttccgcgagatgtttacggcctgt
accaccttcgaaagcaatattgcatacaccctacgcttcatgattgacaagaaggtcacc
ggtatgaactggctggaggttccgccgggctcgtacaggcttcgaacggagctcgagaaa
gcgtcaaattgtcaaatcgaactagagacatcagccgagacattgatttcacatgctcct
gagggcgaatggtccaagatggcgcccttcagagtgctcagctacgatattgagtgttca
ggacggaagggagtcttcccagatgcccggctagacccggtgatccagattgccaacatg
gtcaccgcccatggttccacggtccctttcattcggaacgtcttcaccctcaatacttgc
tcccatatcgcaggcagtcaggtcttggaattcaaatcagaagatcagcttttggctaaa
tggcaagcgtttgtcgccgagtgtgatcccgacctcgtcataggttataacactagcaac
tttgatatgccttatctcctcgatcgcgccaaggcattgaaagtcgcatcattcccttat
ctcggtaggatgcgaaattctcaaacagcagtcaaggagactcacttttcatcaaaagcc
tatgggactcgtgattccaaagaaacacatctagacggacgtctccaactggacttacta
caggtcatgcagagagactacaagctaagaagttatacattgaattccgtgtgtgctcac
ttcctaggtgagcagaaagaggacgttcatcattcgatcattaccgacttacaaaatggc
agtgcggagaccaggcgacgtctcgccgtatattgtttgaaggacgcttatttgcctcag
cgtctgatggacaaactgatgtgctttgtcaattataccgaaatggcccgagtaacgggg
gttccattcaactacctgttatctcgaggccagcagatcaaggtggtttcccagctctat
cgaagggccaacgagcattcttatctcgtgcctgcgctcaagcatgaaggctccgatgag
ccttacgacggagcaacggtcatggagcctgtccggggcttctacgacgtgccgatcgca
actctcgattttgcatccctctatccatcgatcatgatggcccacaacctctgctacacc
actttgacagacgctaaaacggtcaagctgttagaactacgacaagatgaggatttcatc
atcacccccaacggagattattttgtcaaggcatccaagcggaaaggtcttctggcgatc
gtccttgaagaccttctgtcggcccggaagcgcgcaagggccgagttgaagctggagacg
gacccgttcaagagggccgtcttggatggacgacagctagcgctgaaaatcagtgctaac
tcagtctatgggttcactggagcgacggtgggcaagttaccatgtctaccaatctcgatg
agtgtcactgcttttggcagggagatgatcaagatcactaaaaacgaggttgagttgaag
tacacaaaggccaatggatatgatgatgatgctgaagtaatctacggagataccgactca
gtcatggtcaagttcggctgtgctgaggctgcggattttgtgagcgccaagttccagaaa
ccaatcaagctggagttcgaaaaagtatatttcccgtacctccttatcagtaagaagcga
tacgcaggcttgcattggacaaagctcgagaaacacgacaagatggatgcaaaaggaatc
gagaccgtgcgacgggacaattgtccgttggtctcgacggtcatcgagacttgcttgaag
aagatgctgatcgaccgggacgtcaagggggcggaggcatacaccaagcaggtcatctcc
gacctcctccagaaccggatcgatctctcccaactagtgatcaccaaggccctggctaag
gccgactacgccgccaaacaggctcacgtcgagctggccaaacggatgaaaaaacgggat
gctggcagtgcgcctgcgcttggggatcgtgttgcctacgtgatcatcaaaggcaccaaa
gatgctcgggcctatgagaaatcagaggatcctctgtacgtgcttgagaacaacatcccg
atcgacacgaagtactatctcgacaaccaactctcgaagccgttgatgcggatcttcgag
cccatcctcggcgagaagtcctcctcactccttgctggagaccatacccggatcgtctcg
attgccacacccactcaaggcggcttgatgggcttcatcaaacgcaccgagacctgtctg
ggctgtcgagtgccgttgggcaagacgaccaaagataccaacaccgccgtttgcaagaac
tgtagaccgaagactgccgctttgtattccaaacagatggctctcacgcaagggtttgaa
aacgcatttgcgagattatggactcaatgtcaaagatgtcaaggctcgttacatcaggaa
gttatctgcaccgcaagcgattgtccgatcttttacatgcgcactaagagtcgtaaagac
gtcgaggactcttatgccgtccttcaacgcttcgatggggcttggtag
DBGET
integrated database retrieval system
