Pyricularia grisea: PgNI_03496
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Entry
PgNI_03496 CDS
T09406
Name
(RefSeq) uncharacterized protein
KO
K18748
protein SSD1
Organism
pgri
Pyricularia grisea
Brite
KEGG Orthology (KO) [BR:
pgri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgri03019
]
PgNI_03496
Messenger RNA biogenesis [BR:
pgri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
PgNI_03496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_CSD1
DUF5774
Motif
Other DBs
NCBI-GeneID:
41958460
NCBI-ProteinID:
XP_030984195
UniProt:
A0A6P8BAJ1
LinkDB
All DBs
Position
Unknown
AA seq
1353 aa
AA seq
DB search
MEQQQQQQPQQAQQQPQPQAGGVAGPAGRRLHIAHRRSPSELTPLMSMFANPNMEQLAIQ
QQIELLQQQQQQLQAQQQYVNLGMLPGQGMPGGAFNPLQPAMGPQGGFQFPNQLQQQQQQ
QAQQQASMQQAPSHPLSHRRNQSALPNMGIGPPPAPSSGASGSAFNFETTSGQGRENSGG
GRGGRGGGGSGGGHQRRHSLALADAKKAAELAQQKRTTTGFQFPGPNASDPSTSAETPGE
DSKPAAQPAAENQAPQGPSSRGRGGGHGRSQSMAVGRGGGRGNMSGDGGRGGHGRSSSRN
FDSNWRNNQGGQGDQQQQGFQQQGHRSRGSMSQQGAPIGAFQYPGQPQLVQMPGQMMIPG
MYAGQQQLTPMQIQQLQALQAAQMNGQHLVGLQGSQHAPQMGQQPQQQQRKTLFTPYLPQ
ATLPALLGDGQLVSGILRVNKKNRSDAYVSTQDGLLDADIFICGSKDRNRALEGDLVAVE
LLDVDEVWGQKREKEEKKKRKDITDTRSGSTNGGNQNNANGEDGNAGEGGIRRRGSLRQR
PTQKKNDDVEVEGQSLLLVEEEEISDEQKPLYAGHIVAVIERVAGQMFSGTLGLLRPSSQ
ATKEKQEAERAARDGGRHQDSRHQEKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHMDY
ADRIFVACIKRWPITSLHPFGILVEQLGKMGDLKVETDALLRDNNFSSDDFSDAVLRSVG
LQEWSIAKEDEAAIGERRDFRDEKTFTIDIDGSTELGNAVHVKTKPDGKIEIGIHVPDVA
HFIKPNSLVDREAKKRGTAVHLINRTCALLPPKLAKEVCSLDPSEERLTVSVVFQVNPHN
GVVADGDTWIGKSIIKSGGKLSLDEINTALSSDSAFSHDVVSQKDVQILNAVAQKFREAR
LGAGGEPIAPLRLFKQLDDENIPIEHNIFDSKEATELVEELMHKVNAAVAQRLAEGLPEK
ALLRRHAPPNPRRLQTIAERMNSLGYELDTSSSGALQNSLFKVDNEDIRKGIETLLLKSM
QRAKYFIAGKLAKQLWPHYALNLPLYTHFTSPTRRYADIMVHRQLDSILSEGKVEYNEDL
ENLVKTVESCNTKKDSAQNAQEQSIHIESCRKMDKVRQDAHGELISEGIVICVYESAFDV
LIPEWGFEKRVHCDQLPLKKAEFRKEKRVLELYWEKGVPSSAYVPEDERPKAAASQRVSN
AMAAARHAEEAQRAKKEREEAARKQTETGTISTDDVDALFDDDEDNGSDITEAMAGASLA
ERPTQSVPGSPARTSAVGTLHRTKSESKVPAVEPAESRLSNKEKYLSLFKLREEGGEYIQ
DVTEMARVPVILKTDLSKSPPCLTIRSLNPYAL
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaacagcagcagcagccgcaacaggctcaacaacagccccagcctcaagct
ggcggtgttgctggtccggctggccgtcgcttgcacattgcccatcgccgcagcccatca
gagttaactccactgatgagcatgtttgccaatcccaacatggagcaactagccatccag
caacagatcgagctacttcagcagcagcagcagcagcttcaggcacagcagcaatatgtc
aatctaggcatgcttccagggcaaggtatgcctggcggcgcattcaatcctttgcagccc
gccatgggcccccagggcggttttcaattcccgaaccagctacaacagcagcagcagcag
caggcgcagcagcaggctagcatgcagcaagctccttctcaccctctctcacatcgccgt
aatcagtcggctcttccgaacatgggtattggaccgcctccggctccctcgtcgggtgca
tcgggctctgccttcaacttcgagaccacctcaggtcaaggccgcgaaaactctggtggc
ggtcgtggaggtcgcggaggaggtggttccggtggcggtcaccagagaagacactctttg
gcgcttgcagacgcaaagaaggcagctgagctcgcccagcagaagcgcacaacgaccggc
tttcagttccctggccccaatgcatctgatccatctacctcggccgaaactccgggcgaa
gatagcaagcctgccgctcagcctgccgccgagaaccaagcgccgcaaggcccttcgtct
cggggccgaggcggcggtcacggtaggagccagagcatggccgtgggccgtggtggtggc
cggggcaacatgtcgggtgatggcggtcgtggtggacacggtcgttcttcttcccgcaac
tttgacagcaactggcgcaacaaccagggtggtcaaggtgaccaacagcaacaaggcttc
cagcaacagggccaccgttctcgtggctccatgagccagcaaggcgcacccattggcgct
ttccagtacccagggcagcctcagcttgtgcagatgccaggccagatgatgattcctggt
atgtacgccggacagcaacagttgactcctatgcagatccagcagctccaagctctgcag
gctgcgcagatgaatggtcagcacttggttggtctgcaaggcagccaacacgcccctcag
atgggtcagcaacctcagcagcagcagcgcaagacgctctttaccccctatttgccccag
gcaacccttcctgccctccttggagatgggcagcttgtttctggtatccttcgcgtcaat
aaaaagaaccgtagtgacgcgtatgtctcgacccaggatggtctacttgacgcggatatc
ttcatttgcggaagcaaggatcgtaatcgcgccctggaaggcgatcttgtagccgtcgag
ctccttgatgttgatgaagtctggggacagaaacgtgagaaggaagagaagaagaagcgg
aaggacattaccgacactcgttctggctctaccaacggtggaaaccagaacaatgccaac
ggtgaggatggaaacgctggagaaggtggcatccgccgccgtggtagtctgaggcagcgc
ccgacgcagaagaagaatgacgacgtcgaggttgaaggccaaagccttctgctcgttgag
gaagaggagattagcgacgagcagaagccactgtacgctggccatattgttgctgtcatc
gagcgtgtcgcgggccaaatgttctctggtaccctgggtctgctgcgtcccagtagccag
gccaccaaggagaaacaagaggcggagcgtgctgccagggatggcggccgtcatcaagac
agccgccaccaggagaagccaaagattgtctggttcaagcctacggacaaacgcgttccc
ctcattgccattccgactgagcaggctcctcgggacttcgtcgagaagcacatggactat
gccgatcgcatctttgttgcctgcatcaagaggtggcctatcacatcgctccaccccttc
ggaatactcgtcgagcagcttggtaagatgggtgacctgaaggttgagacggatgcgctg
ctccgtgacaacaacttctcctcggatgacttctcggatgctgttctgcgcagcgttgga
cttcaagagtggtcgatcgccaaagaggacgaggccgccattggcgagcgtcgtgacttc
cgggacgaaaagaccttcaccattgacatcgacggctctacagaactaggcaatgctgtt
cacgtaaagaccaaacccgacggcaagatcgagatcggcattcacgtgcctgacgtcgcc
cactttatcaagcccaactcactggttgaccgtgaggccaagaagcgtggaactgcagtc
cacttgattaacaggacatgcgcactcctgccacccaaattggcaaaggaagtttgctct
cttgacccgtccgaggagcgtttgaccgtcagtgtcgtgttccaggtcaatccccacaat
ggtgttgtggcagacggcgacacttggattggtaagagtataatcaaatctggcggcaag
cttagccttgatgagatcaacacggccttgtcgagcgattctgcgttcagccatgatgtc
gtgtcacagaaagatgttcagatccttaatgctgtcgcacagaagttccgggaagcccgt
ctgggcgctggcggagagccaatcgcgccacttcggctcttcaagcaactggatgatgag
aacattcccattgagcacaacattttcgattccaaggaagcgaccgagttggtcgaggag
ctgatgcacaaggtcaacgccgctgtcgcacagcgccttgccgaggggttgcccgaaaag
gcgctcctgcgtaggcacgcaccgccgaatccgcgtcgtctgcagaccattgccgagcgc
atgaactcactcggttacgaactagacacgtcgagcagcggtgctcttcagaacagcctg
ttcaaggttgacaacgaagacatcaggaagggtatcgagacgttgctgctcaagtctatg
caaagggccaagtacttcattgctggcaaactggccaaacagctgtggcctcactacgcg
cttaacctgccgctttacactcatttcaccagccctacaaggcgttatgcggacatcatg
gttcaccgccagcttgactccatcttgtccgagggcaaggttgagtacaacgaggatctt
gagaacctcgttaagaccgtcgagtcctgcaatactaagaaggactcggcacagaacgcc
caggagcagagcatccacattgagtcttgccgcaagatggacaaggtacgccaggatgcc
cacggagagctcatcagtgaaggtatcgtcatttgcgtgtacgaatctgcgtttgacgtt
cttattcccgaatggggttttgagaaacgtgtgcactgcgatcagctgccactcaaaaag
gcggagttccgcaaggagaagcgtgttctggagctttactgggagaagggcgttccaagc
tcggcttacgtgccggaggacgagcgtccaaaggctgccgcctcgcagcgtgtcagcaac
gccatggcggctgcacgtcatgcagaggaggcccagcgggccaagaaggagcgagaagag
gcggcgcgcaagcagaccgagacgggcactatttcgacggatgacgttgatgcgctcttc
gacgacgatgaggataacggctcagacattactgaggccatggccggcgcatcgctcgcc
gaacgtccaacccagagtgtcccaggctcccctgctagaaccagtgccgtcgggaccctt
caccgcacaaagtcggagtccaaggtgcccgctgtcgagccggcagagagtcgcctgtcg
aacaaggagaagtacctcagccttttcaagttgagggaggagggtggcgaatatatccaa
gacgtcaccgagatggcgcgcgtgcctgtaatcctcaaaacggatctcagcaagagccca
ccgtgcttaaccattcggtctctcaacccgtatgctctttga
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