Porphyromonas gingivalis TDC60: PGTDC60_0517
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Entry
PGTDC60_0517 CDS
T01516
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PGTDC60_0517 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgt03400
]
PGTDC60_0517 (ung)
Enzymes [BR:
pgt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PGTDC60_0517 (ung)
DNA repair and recombination proteins [BR:
pgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PGTDC60_0517 (ung)
Prokaryotic type
PGTDC60_0517 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
ECM1
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
BAK24686
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All DBs
Position
550107..550775
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AA seq
222 aa
AA seq
DB search
MKEVRIEAGWKKVLQEEFDKFYFEKLTDFVREEYRQSPIYPPARFIFRAFDTCPFDRVKV
VILGQDPYHEPGQAEGLAFSVPTGIPIPPSLRNICEEIRTDTGQPAHIDGGSLLPWVEQG
VLLLNATLTVRASQAGSHQGHGWETFTDAAIEALAKRREHLVFLLWGSYARRKSAMIDPR
CHLILEAPHPSPLSAHRGFFGCKHFSRTNAYLRQHGIAPIVW
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggtacgaatcgaagccggatggaaaaaggttttacaggaagaattcgataaa
ttttatttcgaaaagctgaccgactttgtgcgtgaagagtatcggcagagtccgatttac
cccccggcccgatttatttttcgagcatttgacacttgccctttcgaccgcgtcaaagtc
gttattcttggacaagatccctatcatgaacccgggcaagccgaagggttggctttctca
gtgccgaccggtatacccattcctcccagcttacgcaatatctgcgaagagattcgtacc
gataccggacagccggctcatatagatggaggaagtcttttgccgtgggtagagcaagga
gtattactgctcaatgccacgcttactgttcgtgctagtcaggccggtagccaccaaggg
catggatgggagacctttaccgatgcggccatagaagccttggccaagcgtagagaacac
cttgtctttctcctctggggaagttatgcccgccgaaaatcagccatgatcgatcctcgc
tgtcatctcattctcgaagcacctcatccttcgccactctcagcacatcgcggttttttt
ggctgcaagcatttcagccgaaccaacgcatatctccgccagcacggcatagccccgatc
gtttggtag
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