Porphyromonas gingivalis TDC60: PGTDC60_1702
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Entry
PGTDC60_1702 CDS
T01516
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt00470
D-Amino acid metabolism
pgt00550
Peptidoglycan biosynthesis
pgt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PGTDC60_1702 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PGTDC60_1702 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgt01011
]
PGTDC60_1702 (murD)
Enzymes [BR:
pgt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PGTDC60_1702 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pgt01011
]
Precursor biosynthesis
Amino acid ligase
PGTDC60_1702 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
MurD_N
FAD_oxidored
HI0933_like
Pyr_redox_2
Thi4
DAO
Motif
Other DBs
NCBI-ProteinID:
BAK25851
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All DBs
Position
1774332..1775684
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AA seq
450 aa
AA seq
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MDRLKYDIVVLGAGESGVGAALLAQAKGLHVFVSDYGKIAPKYKEELNRYAIPYEEGRHT
EAIILEAKEIIKSPGIPDTAPIIRQAVTKEIGIVSEIEFAGRYTDAFMVCITGSNGKTTT
TMWLYHTLCKAGLDVGLAGNVGFSLARQVAYDPHPYYVIELSSFQLDNMYDFRANVAILL
NITPDHLDRYDHRFELYAEAKMRITRNQQPEDCFIYWEDDPFISRWVAEHPPVARLLPFA
MEARTDNTTAWINEKNELVVMNLNSPFVMDEELLALSGMHNRHNAMATAIAAKAMDIKNE
AIREALQDFKNVPHRLEKIARVKGVDYINDSKATNVNSTWYALESMKTRVILILGGTDKG
NDYTDIENLVLSKVDGLIFLGIDNEKLHKFFDGKISRIADACSMHEAVSLAYKMASKGDT
VLLSPACASFDLFQNYEDRGDQFRKEVLNL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaccgattgaaatatgatatagtcgttctcggagcaggagaaagcggagtaggagca
gctcttttggctcaagccaaaggtctgcatgtatttgtatccgactacggaaagatagcc
ccgaaatacaaggaagaacttaaccgatatgccataccgtacgaagaaggtaggcacaca
gaggcgataatcctcgaagcaaaagaaattatcaaaagcccgggtattcccgacactgct
cctattattcgacaggctgttaccaaagagataggtatcgtttcggaaatagagttcgcc
ggacgttacaccgatgcatttatggtgtgcatcacgggtagtaatggcaagacaacaaca
accatgtggttgtatcacacgctctgtaaggcaggtttggatgtaggtttggcaggcaat
gtcggttttagtctggccagacaggtcgcttacgatcctcatccttattatgtaatagag
ttgagcagttttcaactggacaacatgtacgacttcagggctaatgtggccattctgctc
aatattacaccggatcatttagatcgatacgatcaccgattcgagctttatgcagaagcg
aaaatgagaatcactcggaatcagcaacccgaggattgcttcatctactgggaggatgat
ccttttatcagccgatgggtagccgaacatcctcctgtagcccgtcttctaccgttcgca
atggaagctcgaacggataatacaactgcttggatcaatgaaaagaacgaattggttgtc
atgaatcttaattcaccttttgttatggatgaggaacttttagctctgtccggcatgcac
aacaggcacaatgctatggcaactgccattgctgccaaagctatggatattaagaatgag
gctattcgagaagccttgcaggatttcaagaatgtaccgcatcgactggaaaagattgct
cgcgtaaagggtgtcgattatatcaatgactccaaagctacgaacgtaaattctacctgg
tatgctctggagagcatgaaaaccagagtaatactcattctcggagggacagacaaaggc
aatgactatacagatatagagaatctggtattgtctaaagtcgatggactgatctttttg
ggcatagataatgagaaactccacaaattcttcgatggcaagatctcgcggattgcagat
gcatgctcgatgcatgaagctgtttctttagcatacaagatggcatccaaaggtgatacg
gtactcctttctccagcttgtgccagtttcgatcttttccaaaactacgaagatcgtggc
gatcagtttcggaaagaggtattaaatctatga
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