KEGG   Pantherophis guttatus (corn snake): 117661180
Entry
117661180         CDS       T07329                                 
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
pgut  Pantherophis guttatus (corn snake)
Pathway
pgut04115  p53 signaling pathway
pgut04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pgut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117661180 (COP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    117661180 (COP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pgut04121]
    117661180 (COP1)
Enzymes [BR:pgut01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117661180 (COP1)
Ubiquitin system [BR:pgut04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117661180 (COP1)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117661180 (COP1)
SSDB
Motif
Pfam: WD40 zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 WD40_like zf-rbx1 zf-RING_10 zf_C2H2_10 zf-RING_11 Sina_RING EAD4
Other DBs
NCBI-GeneID: 117661180
NCBI-ProteinID: XP_034265634
UniProt: A0A6P9B7P8
LinkDB
Position
Unknown
AA seq 711 aa
MSGSRPSPQHPPAGPGAAGPPGSSSTSSVTTSACLGTTMATGTAMASGSSAVPSRPVLVA
AAVSGSSCSGGLSRLAGTRVGSGSGAASSGTRKRPLLTPLCNGLLNSYEDKSNDFVCPIC
FDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQR
FEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAA
QLQILMEFLKVARRNKREQLEQIQKELSVLEDDIKRVEEMSGLYSPVSEDSTVPQFEAPS
PSHSSIIDSTEYSQPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRLS
DDSRTSNQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAG
VTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDG
FTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCC
VKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDS
QLKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKF
DTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq 2136 nt   +upstreamnt  +downstreamnt
atgtccggaagcaggccatcgccgcagcaccctccggccgggccgggtgctgcgggccct
cccggctcctcctcgacctcctcggtcaccacttcggcctgcttgggcaccacgatggcg
acaggcaccgcgatggcgtcgggctcctcagcggtcccctcgcgacccgtgttggtggcg
gccgccgtgtccggatcctcctgcagcgggggcctttctcgcctggcggggacccgagtc
gggagcggcagtggcgcagccagcagcggcaccaggaagaggccgcttctgactccgctt
tgcaacggccttctgaattcctacgaggacaaaagcaacgatttcgtctgtcccatctgc
tttgatatgattgaagaagcttacatgacaaaatgtggacacagtttctgttacaaatgt
attcatcaaagcctggaagataacaacaggtgtcccaaatgtaattatgttgtggataac
attgatcatctatatcccaactttttagtgaatgagctcatccttaaacagaagcaaaga
tttgaggaaaagagattcaaattggaccattcagtgagtagcaccaatgggcacaggtgg
caaatatttcaagatttgctgggaacagaccaagacaatcttgatttggccaatgttaac
ttaatgttggaacttctggtgcagaagaagaaacaactggaggcagagtcccatgctgcc
cagctgcagattttgatggaattcctcaaggttgccaggagaaataagagagagcagtta
gagcaaatccagaaggagctgagtgttttggaagatgatattaaacgagtagaggaaatg
agtggcttgtattcaccagtcagtgaagacagcactgtgccccagtttgaagcgccgtct
ccttcacacagtagcattattgattctacagaatatagccaacctggatttagtggcagt
tcccagactaagaaacagccatggtataatagtactttagcttcaaggaggaagagactt
acagctcattttgaagatttggaacaatgctacttttctaccaggatgactcgtctatca
gatgatagtagaacctcaaaccagctggatgaatttcaagagtgcctgtctaagtttact
cgctacaattctgttcgacctttggcaacactatcttatgcaagtgatctctacaacgga
tctagcatagtctcaagtattgaatttgatcgagactgtgactattttgctattgcggga
gtcacaaagaagattaaagtctatgaatatggcacagtcattcaggatgcagttgatatt
cattatccagaaaacgaaatgacatgtaattccaaaatcagctgtatcagctggagtagt
taccacaaaaaccttttggccagcagtgactatgaaggaacagtgatcttatgggatgga
ttcacagggcaacgttcaaaagtctatcaggagcatgaaaaaagatgctggagtgtggac
tttaacttgatggatcctaaactcttggcttcaggttctgatgatgcaaaagtgaagcta
tggtcaaccaacctggacaattcagtagcaagcattgaggccaaggcaaatgtgtgttgt
gtaaaattcagcccttcatccaggtatcatcttgcttttggctgtgcagatcactgtgtc
cactactacgatcttcggaacactaaacagcccattatggtcttcaaagggcaccgcaaa
gctgtttcatatgcaaagtttgttagtggagaagaaattgtttctgcgtcaacagatagc
cagctaaagttatggaatgtagggaagccacattgtttgcgttcttttaagggtcacatc
aatgagaagaattttgtaggcttggcatctaatggagactatattgcctgtggaagtgaa
aataattcactttacctgtactataaaggtctctcaaagacactgctaaccttcaaattt
gacactgtcaaaagtgtcttggacaaagaccgtaaggaggatgacacaaatgaatttgtc
agtgctgtatgctggagggcactaccagatggggagtccaatgtattgattgctgctaac
agtcagggtacaattaaggtactggaactggtatga

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