Pantherophis guttatus (corn snake): 117670486
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Entry
117670486 CDS
T07329
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X3
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117670486 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117670486 (CNOT1)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117670486 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117670486 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
117670486
NCBI-ProteinID:
XP_034281587
UniProt:
A0A6P9CFE1
LinkDB
All DBs
Position
Unknown
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIENPLHYQKSLKPSPHLFTQLSKVIK
LSKVQEVIFGLALLNSFNPDLQVFAAQFIKQKLPDLLRSYIDADVSSNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIEAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRSIITQFGVGEVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGRDKNDGTQTHTWNVEVLIDVLKELNPTLNFKEVTYE
LDHPGFQIRDSKGLQIVVFGVQRGLGLEVFPVDLIYRPWKHAEGQLSFIQYSLINPEIFC
FADYPCHTVSTEILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVVNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAAGMAS
LSLGGPTVPHTQSVPGFPPNLSSAFSTPQSPAKAFPPLSTQNQNTPFSGIGGLSSQLPVG
GLTTGSLGIGTGNLGLPAVNNDPFVPRKLNTSGLNQPAFQQSKVKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFTSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQAPAKTPLAGQVSTVVTTTTTSSTVAKTAIAPVGRVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINDLKPGSLLKDKDRLKNLDEQLSAPK
KDIKQVEELPPITTTTTSTTSATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDSSQPTGILAQPMKQAWATDDVAQIYDKCMAELE
QHLQSVPHTLAMNPQTQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHMTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELAKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
actaagaaaaactaccgagccagccagcaggaaatacaacatattgtgaaccggcacgga
cctgaagcagacaggcatttgctacgctgtctcttttctcatgtggatttcagtggcgat
ggtaaaagtagcgggaaagatttccaccagactcagtttctgatccaggagtgtgcatca
ttgattacaaagccaaacttcatttcaactctgtcctatgctattgaaaatccattgcat
tatcaaaagagtcttaagccatcaccccatctattcacccagctgagcaaagtgatcaaa
ttaagcaaagttcaagaggttatttttggtcttgctttgttgaactctttcaatcctgat
ctacaagtttttgctgctcagtttattaaacagaagcttcctgatcttctgcgctcatat
attgacgcagacgtcagtagcaatcaagaaggtggcttccaagatattgcaatagaagtc
ttgcacctccttctttcccatcttctttttgggcagaagggagcctttggggttggacag
gaacaaattgaagcttttctcaaaacattgcgcagagatttccctcaggagcgttgccct
gtggtgcttgcaccactcctataccctgaaaaacgggacattctaatggacaggatcctg
cctgactctggagggatagcaaaaaccatgatggagagttctcttgcagacttcatgcag
gaagttggctatggcttctgtacaagcgtggaagaatgtcgcagtatcatcacacagttt
ggtgttggggaggttacagctgcccaggttgccagggttttgggaatgatggctcggaca
cactctggattgacagatggcattccattacagtctatttctgcccctggaagtggaatt
tggagtgacggaagagataaaaatgatggaacacagactcatacatggaatgttgaagtt
ttgattgatgtgcttaaagaactgaacccaaccttaaacttcaaggaagtaacctatgag
ctggaccaccctggatttcaaattcgtgatagcaagggcctgcaaattgtagtctttgga
gttcagcgaggattaggactggaggtttttccagttgatctaatatacagaccttggaaa
catgcagaaggccagctctcattcattcagtattccctcattaacccagagatcttctgt
tttgctgactatccctgtcatactgtttccacggagatcttgaaagcaccacctgaggat
gataatcgagaaattgccacatggaagagcctagatttgattgagtccctgttgcggttg
gcagaagtgggccagtatgaacaagtcaagcagctcttcagttttcctatcaagcactgt
ccagatatgttggtcctggctttgctacagatcaacacttcttggcatactttgcggcat
gaactcatatccacacttatgcctattttccttggcaaccatccaaattctgctatcatc
ttgcattatgcgtggcacgggcagggtcagtccccctcaattcgtcagctcatcatgcat
gccatggcagaatggtacatgagaggagaacaatatgaccaagcaaaattatcacgtatt
ctagatgtggcccaagacctgaaggcattgtctatgctgctgaatggtactccatttgcc
tttgttattgatcttgctgcccttgcctctcggcgggaatacctcaaactagacaaatgg
ctcacagataaaattcgggagcatggggagcctttcatccaagcttgtatgactttcttg
aagagaagatgtccctctatcctgggtggtcttgctccagagaaagaccagcccaaaagt
gctcaacttccaccagagaccctagcaacaatgctagcttgccttcaggcttgtgctgga
agtgtatcacaagagctgtcggaaactattctcaccatggtagccaactgcagcaatgta
gtgaacaaagccagacagccaccacctggcgtgatgcccaaaggacgtccccccagtgct
agcagcctggatgccatctcccctgtgcagattgatccacttgctgctgggatggcatct
ctcagtttaggtggcccaacggttcctcatacccagagtgtgcctggatttcctccaaac
ttgagttctgcttttagtactcctcagtcaccagcaaaagcatttccaccgctttctaca
caaaaccagaacacaccttttagtgggattggtggactctcttcacagcttccagtaggt
ggtctcacaacaggtagtctgggtattggaactgggaaccttggcctccctgcagtgaat
aatgatccatttgtgccaagaaagctgaacacatcaggactgaaccagcccgcattccag
cagagtaaggtgaaaccttctgacttatctcaggtatggccagaggctaatcagcacttt
agcaaagagattgatgatgaagccaacagctattttcagcgtatttataatcacccaccc
catcccaccatgtctgtagatgaggtgttagaaatgctacagagatttaaggactctaac
attaaacgggagcgagaagtatttaactgtatgctgaggaatttattcgaagaatatcgt
tttttcccacaatatcccgataaagagctccacataacagcctgtctctttggtgggata
atcgagaagggattggtgacctatatggccctgggcctggccctgcgctatgtgcttgaa
gccttacgaaagccttttacatccaaaatgtactattttggaattgctgcactagataga
tttaaaaatagattgaaggactaccctcagtactgtcagcacttggcttctattagtcac
tttatacagttccctcatcacctgcaggagtacattgaatatggacagcaatcaagagat
cctcctgtgaagatgcaggggtccatcaccacccctggaagtattgccctggcccaggcc
caggcccaggcccaggctccagcaaaaactcctctcgccggccaggttagcactgtagtc
accaccaccaccaccagcagcactgtggcaaagacagccattgcgcctgtgggtcgagtc
agcttcaagaaagatgtgccaccttctattaatacaaccaacattgatactctgctagtg
gccactgatcaaacagagaggattgtagaacctcctgaaaatgttcaggaaaagattgct
tttatctttaataatttgtctcaatccaacatgactcagaaggttgaggaactgaaggaa
acagtgaaagaagaattcatgccttgggtttcacaatatctcgtgatgaagagagttagc
attgagccaaacttccatagtctttattcaaatttccttgacactcttaaaaatccagaa
tttaataaaatggttttgaatgaaacatacagaaatatcaaggtgttgcttacatcagat
aaagctgctgccaacttctcagaccgttcgttgctgaagaacctgggtcactggctgggg
atgataacactggcaaagaataagcccatcttgcacacggacttggatgtcaaatctttg
ttgctagaagcttatgtaaaaggacagcaggaattgttgtatgttgtgccatttgttgct
aaagtattggaatccagtgtaagaagtgtggttttcaggcccccaaatccatggaccatg
gcaatcatgaatgttcttgcagagcttcatcaggagcatgacttaaagctgaatctgaag
tttgaaattgaagtgctctgcaaaaacctggcccttgacatcaatgatctaaaacctggt
agtctcctaaaagataaggaccggttgaaaaacctggatgaacagttatctgctccaaag
aaggatataaaacaagtagaagagctaccaccaattactactaccactacttccacaact
tcagctaccagcaccacatgcacagctactgttcctccacagccacagtacagttaccat
gatatcaacgtatactcactgggagggttagctccacacattactctaaacccgactatt
cccttgttccaagcccatccacagttaaagcagtgtgtgcgccaagccatagagcgtgca
gttcaagaactggttcatccagtagtggatcgttcaattaaaattgccatgactacttgt
gaacagatagtgaggaaggattttgcgctggattcagaagagtcacgcatgcgtgtggca
gcacatcatatgatgcggaacctgacggctggcatggccatgattacctgcagggagccc
ttgctgatgagcattgcgaccaacctgaagaacagctttgccactgcgttgcgggcagct
tcaccacagcagagggagatgatggagcaggctgcagcccagttggctcaagataactgt
gaattggcctgctgcttcattcagaaaacagcagtggaaaaagcaggtcctgaaatggac
aagaggctggcaactgaatttgagctccgaaaacatgcccggcaagagggccgcaggtat
tgtgatcctgtagttttgacttaccaagctgagcggatgccagaacagatcagattgaag
gttggtggtgtggacccaaagcagctagctgtatatgaagaatttgcacggaatgttcct
ggtttcctgccaacaaatgattcaagtcaaccaacaggaatcctggcccagcctatgaag
caagcctgggcaactgatgatgtggcacagatctatgataaatgcatggcagagctggag
cagcacctgcagtctgttccccacactctggccatgaatccccagacacaagctctgcgg
agccttttggaggctgtcgttgtggctcgtaattctcgagatgctattgcagcccttgga
ttgctacagaaggcagttgaaggattattagatgctacgagtggtgcagatgcagacctc
ctcctccggtaccgcgaatgtcatttgcttgtattaaaagccctgcaagatggccgggcc
tatggctctccctggtgtaacaagcagataacaagatgtctgattgagtgtcgagatgaa
tataaatacaacgtagaagcagtggagctcctgattcgtaaccatctagttaacatgcaa
cagtacgaccttcacctggctcagtccatggagaatggcttgaactacatggcagtggcg
tttgcaatgcaactggtgaagatcctgctggtggatgagagaagtgtggctcacatgaca
gaagcagatttgttccataccattgaaactctgatgaggataaatgctcactccagagga
aatgctccagaagggttgccacagttgatggaagtggtgcggtccaactatgaagccatg
attgatcgtgctcatggcggacccaactttatgatgcattctgggatctctcaagcctca
gaatatgatgatcctccaggcttgagggagaaagcagagtatctcctgagggagtgggtg
aatctttaccattctgcagccgctggccgggacagcaccaaagccttctctgcatttgtt
ggacagatgcatcaacaaggaatcctgaaaactgatgacttgatcacaagattcttccgt
ctttgcactgaaatgtgtgttgaaatcagctatcgtgctcaagctgaacagcagcacaac
cctgctgcaaaccccactatgatccgtgccaagtgctatcacaacctggatgcctttgtg
cgccttattgcactgttggtgaagcactctggagaggctaccaacacagttacaaaaatc
aacctgcttaataaggttcttgggatagtagtgggagtccttttgcaggatcatgatgtt
cgtcagagtgaatttcagcaacttccctaccaccgcattttcatcatgttactgttagaa
ttaaatgctcctgaacatgtcctggaaactatcaactttcagactctcacagctttctgc
aatacatttcacatcctgcgacctacaaaagctccaggttttgtttatgcttggttagaa
ctgatctcccatcggatatttattgcaaggatgctggcacatacaccacagcagaagggt
tggcccatgtatgcacaactcttgattgacctgtttaaatatttggctcctttcctgaga
aatgtggaacttgccaagcctatgcaaattttgtacaagggaacactacgtgtgttactg
gtattattacacgatttcccagaattcctttgtgattaccactatggattttgtgatgtg
attcctccaaactgtattcagctgaggaatctgattttgagtgcctttccacgtaatatg
aggcttcctgaccccttcactcccaaccttaaggttgacatgctgagtgagatcaatatt
gctccacggatcctcaccaattttactggtgtgatgccacctcagttcaagaaggatttg
gattcctatctcaaaactcgttctccggtcacgttcctctctgacttgcgcagcaatttg
caggtatcaaatgagcctggcaatcgttacaatattcagctgatcaatgccttggtgctt
tatgtcggtacacaagcgattgcacacattcataataagggcagcacaccgtccatgagc
accatcactcattcagcccacatggacatcttccagaaccttgctgtcgatctggacaca
gaaggtcggtacctcttcctgaatgcaattgccaatcagttgcggtatcccaacagccac
acgcactacttcagctgcaccatgctttacttgtttgcagaagccaatacagaagctatt
caagagcagatcaccagggttttgttagaacgactgattgtaaataggcctcatccctgg
ggcctcttaatcaccttcattgaattgattaaaaatccagcatttaaattctggaaccat
gagttcgttcactgtgctccagaaattgaaaagctgttccagtcagtcgcacagtgttgc
atggggcagaaacaggcacagcaagtaatggaaggaactggagccagctag
DBGET
integrated database retrieval system
