Pterocles gutturalis (yellow-throated sandgrouse): 104464620
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Entry
104464620 CDS
T08540
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pguu
Pterocles gutturalis (yellow-throated sandgrouse)
Pathway
pguu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pguu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104464620 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pguu03019
]
104464620 (CNOT1)
Messenger RNA biogenesis [BR:
pguu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104464620 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104464620 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
Motif
Other DBs
NCBI-GeneID:
104464620
NCBI-ProteinID:
XP_010075687
LinkDB
All DBs
Position
Unknown
AA seq
1730 aa
AA seq
DB search
MNAIWLTTLLLCSRSVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAI
SPVQIDSLAGMASLSLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGF
SGIGGLSSQLPVGGLTTGSLTGIGTGALGLPAVNNDAFVQRKLSTSGLNQPTFQQSKMKP
SDLSQVWPEANQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKRERE
VFNCMLRNLFEEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPF
ASKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQ
GSITTPGSIALAQAQAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDV
PPSINTTNIDTLLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEF
MPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANF
SDRSLLKNLGHWLGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESS
VRSVVFRPPNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDK
DRLKNLDEQLSAPKKDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYS
LGGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRK
DFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRD
MMEQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVL
TYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATD
DVAQIYDKCMTELEQHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAV
EGLLDATSGADADLLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVE
AVELLIRNHLVNMQQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFH
TIETLMRINAHSRGNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPP
GLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMC
VEISYRAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKV
LGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHIL
RPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTK
PMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPF
TPNLKVDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEP
GNRYNIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLF
LNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITF
IELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctatatggctcactaccctacttctctgttctaggagtgtttctcaggagctg
tcagagacgatcctcaccatggtagctaactgcagtaatgtcatgaacaaggctagacag
ccaccacctggagtcatgccaaaaggacgcccgcccagtgctagcagcttggatgccata
tctcctgtacagatcgactcgcttgcaggaatggcatctcttagtttaggtggctcagct
gctcctcatacccagagcatgcaaggcttccctccaaacttgggctctgcattcagtact
cctcagtcaccagcaaaagccttcccacctctttccacccaaaaccagacaacaggtttc
agtggcattggaggactctcttcacagcttccagtaggtggtcttactacgggtagcctg
actggcataggaaccggagccctgggccttcctgcagtgaacaatgacgcatttgtgcaa
cggaagctgagcacatctggactgaaccagcctacattccagcagagtaagatgaaacct
tctgacttatctcaggtgtggccagaggctaatcagcactttagcaaagaaatagatgat
gaggcaaacagctacttccagcgtatttacaaccatccaccgcatccgaccatgtctgtg
gatgaggtcttggaaatgctgcagaggtttaaggactccaacattaaacgagaacgagaa
gtgttcaattgtatgctgaggaacttgtttgaggaataccgtttctttccccagtaccca
gataaagagctgcacattacagcctgcctctttggtgggataatagagaaaggactggtt
acttatatggcattgggcctggccctgcgctatgttcttgaagccttacgaaagcctttt
gcatccaaaatgtactattttggtattgctgcactagatagatttaaaaatagattgaag
gactatccccagtattgtcagcacttggcttctattagtcactttatacagttcccacat
catttacaggagtacatagaatatggacagcaatccagagatcctcctgtgaagatgcag
ggttcaatcaccacccctggaagtattgcacttgcccaggctcaggcccaggcccaagtt
ccagcaaaagctcctcttgctggccaagtcagcactatagtaaccacctcaaccaccacc
actgttgcaaaaaccattacaatcactcgaccaactggagtcagcttcaagaaggatgtg
ccgccttccattaatactaccaacattgatacgctgttagtagcaacagatcaaacagag
agaattgtggaacctccagagaatgtccaggaaaaaattgctttcatcttcaataatctg
tctcagtcaaatatgacacagaaggttgaagaattgaaggagacagtgaaagaagagttc
atgccttgggtatcacagtatctcgtgatgaagagagtcagtattgagcctaattttcac
agcttatattcgaacttccttgacacacttaagaatccagagtttaataaaatggttctg
aatgaaacctacagaaatatcaaggtgctgttgacatcagataaagctgcggccaacttc
tcagaccgttccctgttaaagaaccttggtcactggctgggaatgattactctggctaaa
aataagcccatcttgcacacggatttggatgtgaaatcactgctactggaagcatatgtt
aagggacagcaggagttgctttatgtagtgccatttgttgccaaagtcttagaatccagt
gtcagaagtgtggtcttcaggcctccaaacccgtggacaatggccattatgaacgtttta
gctgagctacatcaagaacatgatttaaaattgaatctgaagtttgagattgaggtgctc
tgcaagaatcttgcactagacatcaatgagctgaaacctggaagtctcctgaaagataaa
gatcgtctgaaaaatctggatgagcagctgtctgctccaaagaaggatgtgaagcagcca
gaagagctaccacccatcacaacaactactgcttcaacaactccagctaccagcaccact
tgtacagccacggttcctccacagccccagtacagttatcatgacatcaatgtctattct
ttaggaggattggctccacatattaccttaaatccaacgattccactgttccaagcccac
ccgcagctgaagcagtgtgtgcggcaggcaatagagcgagcagtgcaagaacttgtccat
ccggtggttgatcggtccattaagattgccatgactacatgtgagcagatagtcaggaag
gactttgcactggattcagaggagtcacgaatgcgtgtggctgcgcaccatatgatgcgg
aacctaactgctgggatggccatgattacctgcagggaacctttgctgatgagcatagct
accaacttgaaaaatagttttgctactgcactgagagcagcctccccacaacagagggac
atgatggagcaagcagctgcccagttagctcaggataactgtgagctagcctgctgcttt
atccagaagacagctgtggaaaaggcaggccctgagatggacaagaggctcgcaactgaa
tttgagctcagaaaacatgctagacaagagggtcgtcggtactgtgatcctgttgtgtta
acttaccaggctgagcggatgccagaacagatcagattaaaggttggaggtgtagacccg
aagcagctggctgtttatgaagagtttgcgcgcaatgtccctggcttcttgcctaccaat
gacttaactcagcctacaggattcttggctcagcctatgaagcaagcttgggctacagat
gatgtcgcacaaatctacgacaaatgtatgacagaactggagcagcacctgcagtccatt
ccacataccctggccatgaatcctcaagctcaagcattgcgcagcctcttggaggctgtg
gtagtggctcgtaactcccgtgatgctattgctgcacttggactgctgcagaaggctgta
gagggcttactggatgccaccagtggggcagatgctgacctcctgcttcgctatcgtgaa
tgtcatctgcttgtgctgaaggctctacaggatggccgcgcatatggatctccgtggtgt
aataaacaaattacgaggtgcctgattgaatgcagagatgagtacaagtacaatgtggaa
gctgtggagctgctaatccgcaaccacctggttaacatgcagcaatatgaccttcacttg
gctcagtcaatggagaatggcttgaactacatggctgtggcattcgccatgcaattggta
aagatcctgttggttgatgagagaagtgtcgcccacgtaacagaggcagatttgtttcac
acaattgagacactcatgaggattaatgctcattccagaggaaatgccccagaaggatta
ccccagctgatggaagtggtccgatcaaactatgaagcaatgattgaccgtgctcatgga
ggtcccaatttcatgatgcattcaggaatttcccaagcctctgagtatgatgatccgccc
ggtctgagggagaaggcagaatacctgctgagggagtgggtgaacctctaccattccgct
gcagcaggccgtgacagtaccaaagcattctctgcgtttgttggacagatgcaccagcaa
ggaatcctgaaaacagatgacctgatcacccgctttttccgtctctgcaccgaaatgtgt
gttgaaatcagctatcgtgctcaggctgagcaacaacataaccctgctgccaaccccact
atgattcgagccaagtgctaccacaatctggatgcctttgtgcggcttattgcactgcta
gtaaagcactctggggaggcaaccaacacagttacaaagatcaacctcctgaataaggtt
cttggtattgttgtgggagttcttctgcaagaccatgatgttcgtcagagtgagtttcag
cagctcccttaccatcggattttcatcatgttgctgttggaattaaatgctcctgagcat
gtgctggagaccatcaacttccagacactcacagctttctgtaacacatttcacatcctg
aggcctacaaaagctccaggttttgtttatgcctggttggaactgatctcccatcggata
tttattgcaagaatgctggcacatacaccacagcagaagggttggcccatgtatgcccag
ttattgattgatcttttcaagtacttggctcctttccttagaaatgtggaactcaccaaa
cctatgcaaattctttacaagggcactctgcgtgtgttgctggtcttgttgcatgatttc
ccagaatttctttgtgactaccactatgggttctgtgatgtgatcccacccaactgtatt
cagctgaggaatctgatcctgagtgccttcccacggaacatgaggcttccagatcctttc
acccccaatctaaaggtggacatgttaagtgagattaatattgctccacgaatactcaca
aatttcactggagtgatgccacctcagttcaagaaagatttggattcctatctcaaaacc
cgttctccagtcacctttttgtctgacttgcgcagcaacctacaagtatcaaatgaacct
ggcaaccggtacaacatccagctgattaacgcactggtgctctacgtaggtactcaagct
attgcgcacattcacaacaaaggcagcacaccctctatgagcaccattacccactcagct
cacatggacatcttccagaatttggcagtagacctggacactgaaggccggtatcttttc
ttgaatgcaattgccaatcagctacgataccccaacagtcacacccactacttcagttgt
accatgctgtacctgttcgcagaggccaacacggaggctatccaggagcagatcactagg
gttctcttggaacgactgattgtaaataggcctcatccctggggtctccttattactttc
attgagctgataaaaaatccagcttttaagttctggaaccatgagtttgttcactgtgct
ccagaaattgagaagctgttccagtcggttgcacagtgctgcatggggcagaagcaggcc
cagcaagtcatggaagggactggtgccagttag
DBGET
integrated database retrieval system
