Panicum hallii (Hall's panicgrass): 112879079
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Entry
112879079 CDS
T07366
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
112879079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phai03000
]
112879079
Transcription factors [BR:
phai03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112879079
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
Motif
Other DBs
NCBI-GeneID:
112879079
NCBI-ProteinID:
XP_025799200
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Position
1:9332091..9335133
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AA seq
389 aa
AA seq
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MGDGAMCELLVDDHSELRHVSGAEDLFSILETWEECMNGGGGGGGGSAAAMPAYSQSSTG
GSESAGAVAGARPTANGRRRAGDEEKGVGRGAPAQKKQKGSSTAAAAQDAAADEGAVKMS
HIAVERNRRKQMNEHLAVLRSLMPCFYIKRGDQASIIGGVVDYIKELQQVLRSLEAKKHR
KAYAEQVLSPRPAVSAASPRPLLKSTPPLSPRVAVPISPRTPTPGSPYKPSGGGGGAGSS
RLSHPAAAAYMIPSPAMTPTTSSSSSSYAHDHHQQHYPTTQPYLPTLDSLVTELAAQAAG
GRPAAAGLALPDVRVEFAGPNLVLKTVSHRAPGQALKIIAALESLSLEILHVSVSTLDDT
MVHSFTIKIGIECELSAEELVHEIQQTFL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgggggacggcgccatgtgcgagctcttggtcgacgaccacagcgagctccggcacgtg
tcgggcgccgaggacctgttcagcatcctcgagacgtgggaggagtgcatgaacggcggc
ggcggaggtggcggcggttctgcggcggccatgccagcgtatagccagagctccaccggt
ggttctgagtctgctggcgccgtggcgggggctaggccgacggcgaacggccggcggcgc
gcgggcgacgaggagaaaggcgtcggccgtggcgctccggcgcagaagaagcagaagggt
tcgtcaaccgcggcggcggcacaggatgcggccgccgatgagggggcggtgaagatgtcg
cacatcgcggtggagcgcaaccggaggaagcagatgaacgagcacctcgccgtgctgcgc
tcgctcatgccatgcttctacataaagaggggagaccaagcgtccatcataggaggggtg
gtggactacatcaaggagctgcagcaggtgctgcgctcgctggaggccaagaagcaccgc
aaggcgtacgcggagcaggtgctcagcccgcggcccgccgtgtcggcggccagcccgcgg
ccgctcctcaagtcgacgccgccgctcagcccgcgcgtggcggtgccgataagcccccgg
acgccgacacccggcagcccgtacaagccgtccggcggcggcggcggggctggaagcagc
aggctctcgcaccccgccgcggcggcctacatgataccgtcgccggccatgacgccgacg
acgtcgtcctcgtcgtcgtcctacgcgcacgatcatcatcagcagcactacccgacgacg
cagccgtacctgccgaccctggacagcctcgtgaccgagctcgccgcgcaggccgccggc
ggcaggcccgcggcggccgggctcgcgctccccgacgtgagggtggagttcgccgggccc
aacctggtgctgaagacggtgtcgcaccgcgcgccggggcaggcgctcaagatcatcgcc
gcactcgagagcctctcgctcgagatcctccacgtcagcgtcagcaccctcgacgacacc
atggtgcactccttcaccatcaagattgggatcgagtgcgagcttagcgcggaggagctt
gtgcacgagattcagcaaacgttcttgtga
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