Panicum hallii (Hall's panicgrass): 112883160
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Entry
112883160 CDS
T07366
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112883160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112883160
Membrane trafficking [BR:
phai04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112883160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
112883160
NCBI-ProteinID:
XP_025804196
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Position
2:44890859..44899227
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AA seq
762 aa
AA seq
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MSEFLDLEAQDGIRMPWNVIPGTKQEALNCVIPVSAIYTPLKSIPDIPVLPYSPLRCRMC
RSILNPFSIVDYVAKIWVCPFCFQRNQFPQHYSSISENNLPAELFPQYTTVEYISSAETG
PVVPPVFIFVVDTCMIEEEIGYLKSALAQVVELLPDNSLVGFITFGMYVQVHELGFGLLP
KSYVFKGTKEVTKEQILEQMCFFAGKKMPTTGVIAGTRDGLSSESISRFLLPASECEFVL
NSVIEEMQKDPWPVPADQRASRCTGVALSVAANLLGVCVPGSGARIMAFVGGPSTEGPGS
IVSKSLSEPIRSHKDLDKDSAPLYDKAVKFYDQIAKQLVHQGHVLDLFACAVDQVGVAEM
KVAIEKTGGMVVLAESFGHSVFKDSLRRIFQSADDNLGLSFNGILEINCSKDVKVQGIIG
PCTSLEKKSPLSSDTVIGQGNTSAWKMCGLDKKTSLCFVYDIAKKDGPDSIGQSTSNQFY
FQFLTYYQHNEGQMRLRSTTISRRWVSGTDNVEELVAGFDQEAAAAVMARLVSFKMETEV
DFDPVRWLDRALIRICSKFGDYQKETPSSFSLSPRLSIFPQFIFNLRRSQFVQVFNNSPD
ETAYFRMMLERENVANAVVMIQPSLISYSFQSGPEPVLLDATAIASDKILLLDSYFTVVI
FHGVTIAQWRKAGYQDQEGHEAFAQLLKVPHEEANSIIKERFPVPRLVVCDQYGSQARFL
LAKLNPSVTYNSDNPSPGGDVIFTDDVSFQVFMDHLQRLAVQ
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagttccttgacctagaggcacaagatgggataaggatgccctggaatgttatt
ccaggcacaaagcaggaggctttgaactgtgtgattcctgtttccgctatctatacacct
ctgaagtcaattcctgatattccggttctcccatattcaccccttcgctgtcgcatgtgt
cgttccatcctcaaccctttctccattgttgactatgttgctaagatctgggtctgtcca
ttctgctttcagcgcaatcaattccctcaacactactcctcgatctcagaaaataatctc
cctgcagaactctttcctcagtataccactgttgagtacatatcatcagccgaaactggt
cctgtagtgccaccggttttcatttttgttgtagatacttgcatgattgaagaagaaatc
ggttatttgaagtctgcattggcacaagttgttgagctattgccagataattcccttgtt
ggattcattacttttggaatgtatgtgcaggttcatgaattgggttttggcttgttgcct
aagtcatacgtgttcaagggaacaaaggaggtcaccaaggaacaaatattggaacaaatg
tgcttctttgcagggaagaaaatgcccacaactggggtgattgctggtaccagagatggt
ctttcatctgagagcatctctaggttcctgctgcctgcttctgaatgcgagtttgtgttg
aactcagttatagaagaaatgcaaaaggacccttggcctgttccagctgatcagcgggca
tcaaggtgcactggagttgccttaagtgttgcagccaatctccttggggtttgtgtccct
ggatcaggtgctaggataatggcatttgttggtggtccatctacagaaggccctggttct
attgtatccaaatccttatcagagccaattcgctcacacaaggaccttgataaagactcg
gcaccactatatgacaaagctgttaaattctacgatcaaatagcaaagcagcttgtgcac
caagggcatgtgctggatttgtttgcctgtgcagtcgatcaggtaggagtagctgaaatg
aaggttgccattgagaagactggaggaatggttgtgcttgctgaaagttttggtcattct
gttttcaaggactcacttcgccgcatttttcagtcagcagatgacaaccttggtctatca
ttcaatggtattcttgaaattaattgttcaaaggatgtgaaggttcaaggcatcattgga
ccttgtacttccctggagaagaaaagtcctttgtcttcagacactgttattggtcaagga
aacactagcgcttggaaaatgtgcggtcttgacaaaaaaacatcactttgctttgtatat
gacattgcaaaaaaagatggcccagattcaattggtcaatcaacaagcaatcagttctac
tttcaattcttaacctactatcagcacaatgagggccagatgagattaagatcaaccaca
atatccagaagatgggtctctggcaccgataatgtggaggagttagtagctggctttgat
caagaagctgctgctgcagtcatggcacgcttggtgtcatttaagatggaaactgaggtt
gactttgacccagtaagatggcttgatcgagctttgatacgtatatgttctaaatttgga
gactatcagaaggaaacaccctcgtccttcagtttatccccgcgtctatcaatatttcct
cagtttattttcaatttgaggcgttctcagtttgttcaggttttcaataacagtcctgat
gaaactgcatattttaggatgatgttggaaagagagaatgtagccaacgcagttgtgatg
attcagccttcacttatatcctattcatttcagtcaggaccagagccagttctcttggat
gcaactgcaattgcttctgacaagatccttttgttggattcttattttactgttgtcata
ttccatggggtaaccattgcccagtggcgaaaagctggttaccaagatcaagaaggtcac
gaggcgtttgcccagttgttaaaagttccacacgaggaagctaattcaatcataaaggag
cggtttcctgtgccccgtttggtagtctgcgatcaatatggatctcaggctcgattttta
ctggcgaagctaaatccatcagtaacatataactcggataatccctcccctggtggagac
gtcatcttcacagatgatgtgagcttccaggttttcatggaccatctccagcggctagca
gtccaatag
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