Panicum hallii (Hall's panicgrass): 112886125
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Entry
112886125 CDS
T07366
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
phai03110
]
112886125
Chaperones and folding catalysts [BR:
phai03110
]
Heat shock proteins
HSP100
112886125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_18
nSTAND3
AAA_14
AAA_7
bpMoxR
IstB_IS21
RuvB_N
ATPase_2
AAA_28
TniB
TsaE
NACHT
Zeta_toxin
RNA_helicase
DUF815
NBD_SMAX1
AAA_19
Mg_chelatase
ResIII
DNA_pol3_delta2
AAA_25
ABC_tran
T2SSE
CENPH
DUF87
DUF2987
Spectrin_Anc-1
DASH_Spc19
DUF4426
AAA_13
Motif
Other DBs
NCBI-GeneID:
112886125
NCBI-ProteinID:
XP_025807699
LinkDB
All DBs
Position
3:13648782..13652451
Genome browser
AA seq
913 aa
AA seq
DB search
MNPDNFTHKTNEALVAAHEMASEAGHAQLTPLHLAAALAADKGGILRQAITGASGGDGAA
GDSFERVLANALKKLPSQSPPPDSVPASTALIKVIRRAQSAQKKRGDSHLAVDQLLLGLL
EDSQISDCLKEAGVSAARVRAELEKLRGGEGRRVESASGDTNFQALKTYGRDLVEQAGKL
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL
IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVVDTVSILRGLKEKY
EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
KRIQLEVELHALEKEKDKASKARLVEVKKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ
RREELMFSLQEAERRMDLARVADLKYGALQELDAAIAKLEGETGENLMLTETVGPEQIAE
VVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQTEAVNAVAEAVLRSRAGLGRPQQPT
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEE
GGQLTEQVRRRPYSVILFDEVEKAHVSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS
NLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVARL
QMKDVAVRLAERGIALAVTDAALDVILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQEE
IDENCTVYIDAAPAKDELAYKVDRSGGLVNAETGQKSDILIQVPSGAGRSDASQAVKKMR
IMEEDDEDGMDEE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgacaacttcacgcacaagaccaacgaggcgctggtggcggcgcacgagatg
gcgtcggaggctggccacgcgcagctcacgccgctgcacctggcggcggcgctggcggcg
gacaagggcggcatcctgcgccaggccatcacgggggcgtcgggcggcgacggggccgcc
ggggactcgttcgagcgcgtgctggccaacgcgctcaagaagctgccgtcgcagtcaccg
ccgccggactcggtcccagcgtccacggcgctgatcaaggtcatccgccgcgcgcagtcc
gcccagaagaagcgcggggactcccacctcgccgtcgaccagctgctgctaggcctgctt
gaggactcgcagatctccgactgcctcaaggaggccggcgtgtccgcggcgcgggtgcgc
gccgagctcgagaagctccgcggcggggagggccgccgcgtcgagtccgcgtccggggac
accaacttccaggcgctcaagacctacggccgcgacctcgtcgagcaggctgggaagctg
gaccccgtcatcggccgcgacgaggagatccgccgcgtggtgcgcatcctctcgcgccgc
accaagaacaacccggtcctcatcggcgagcccggagtgggaaagacggccgtcgttgaa
ggcctcgcgcagcgcatcgtccgcggcgacgtgcccagcaacctcctcgacgtccgcctc
atcgcgctcgacatgggcgcgctcgtcgccggcgccaagtaccgtggcgagttcgaggag
cggctcaaggccgtgctcaaggaggttgaggaggccgaggggaaggtcatcctcttcatc
gatgagattcacctcgtcctcggcgcgggcaggacggaggggtccatggacgcggccaac
ctgttcaagcctatgctagcgaggggtcagctccggtgcatcggcgccaccacgctggag
gagtaccgcaagtacgtggagaaggacgccgcgttcgagcggcggttccagcaggtgttc
gtcgccgaaccgagcgtggtcgacaccgtcagcattctgagggggctcaaggagaagtat
gaggggcaccatggtgtgaggatccaggaccgcgccctcgtcgtcgccgcgcagctctcc
gcgaggtacatcatgggtcggcacctgcctgacaaagccatagacttggtggacgaggcc
tgcgccaatgtcagggtgcagctcgacagccagccggaggagattgataacctcgagagg
aagaggattcagcttgaagttgagctccacgcgctcgagaaggagaaggacaaggccagc
aaagcccggctggttgaggtcaagaaggaattggacgatttgagggacaagctgcagccc
ctgaccatgaagtacaggaaggagaaggagaggatcgacgagatcaggaagctgaagcag
cgccgcgaggagctgatgttcagcctgcaggaggccgagcgccggatggacttggctcgt
gtggccgacctcaagtacggcgccctccaggagctcgacgccgctatcgccaagctcgag
ggcgaaacaggggagaacctgatgctcactgaaaccgtcggccctgaacaaattgcagag
gtggtgagccgatggaccggcattccggtgacccggcttgggcagaacgacaaggagagg
ctggttggcctggctgataggctgcaccagagggttgtcggccagacggaagccgtgaac
gctgttgcagaggcggtgctgaggtcgagggccggtctcggccggccgcagcagcccaca
ggctccttcctcttcctgggtccgactggtgtgggcaaaaccgagctcgccaaggccctc
gccgagcagctgttcgacgacgagaacctgcttgttcgcattgacatgtccgagtacatg
gagcagcactcggttgctcgtctgatcggagcaccacctggctatgttggccatgaggag
ggtggacagctgactgagcaagtgaggaggaggccgtacagcgtgatcctcttcgatgag
gtggagaaggcgcacgtttcagtgttcaacaccctgctccaggtgctcgacgacggaagg
ctcaccgatgggcaaggcaggacggtggacttcaggaacaccgtgatcatcatgacatcc
aacctcggcgccgagcaccttctcgccgggatggtgggcaagaactccatgaaggtcgct
cgcgatctcgtcatgcaggaggtgaggaggcacttccgccctgagctgctgaaccggctc
gacgagatcgtgatcttcgatcccctgtcccacgagcagctgaggaaggtcgctcgcctt
cagatgaaggacgtggccgtccgtcttgcagagaggggcatcgcgctggccgtcaccgac
gctgccctggacgtcatcctttcactgtcttacgatccggtctatggcgcgcggcccatc
aggaggtggatcgagaagagggtagtgacgcagctgtcgaagatgctgatccaggaggag
atcgacgagaactgcacggtgtacatcgacgccgcgcccgccaaggacgagctggcctac
aaggtggaccggagcggcgggctggtgaacgccgagacgggccagaagtcggacatcctg
atccaggtcccaagcggcgccggcaggagcgacgcctcgcaggccgtgaagaagatgcgg
atcatggaggaggacgacgaggacggcatggacgaggagtag
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