Panicum hallii (Hall's panicgrass): 112886782
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Entry
112886782 CDS
T07366
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00061
Fatty acid biosynthesis
phai00071
Fatty acid degradation
phai01100
Metabolic pathways
phai01212
Fatty acid metabolism
phai04146
Peroxisome
Module
phai_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112886782
00071 Fatty acid degradation
112886782
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112886782
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phai01004
]
112886782
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112886782
Enzymes [BR:
phai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112886782
Lipid biosynthesis proteins [BR:
phai01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
112886782
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of breast milk
112886782
Exosomal proteins of breast cancer cells
112886782
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3572
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
112886782
NCBI-ProteinID:
XP_025808554
LinkDB
All DBs
Position
3:complement(1322434..1331755)
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AA seq
704 aa
AA seq
DB search
MAPQQEQEQPPMDAARRRLRAVSAHLRPPATAAGRGLDANPTAGEYAHVQGYSVVLPEKL
QTGKWNVYRSARSPLRLINRFPENPDIGTLHDNFVYAVETFRDCRYLGTRIREDGTVGDY
KWMTYGETSTSRTAIGSGLIHYGIHEGARIGLYFINRPEWIIVDHACAAYSYVSVPLYDT
LGPDAVQFIVNHATVEVIFCVPQTLSTLLSFITQMPCVRLIVVVGGEDVKIPPTPTNTGV
QIITYRTLHNQGKMSPQPFQPPKPDDVATICYTSGTTGTPKGAVLSHENLIANVAGSSLG
IRFYPSDVYISYLPLAHIYERANQVALLHNGVAIGFYQGDNLKLMDDLAALRPTVFASVP
RLYNRIYAAITNAVKESGGLKERLFHTAYNAKRQAILNGRNPSPMWDKLVFNKIKARLGG
RVRLMTSGASPLSSDVMEFLRICFGGEVLEGYGMTETSCVISTMDIGDKLIGHVGSPNPS
CEVKLVDVPEMNYTSEDQPYPRGEICARGPIIFRGYYKDEVQTREVIDEDGWLHTGDIGL
WLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCFVYGDSFNSSLVAIVAV
EPEVLKAWAASEGIQYEDLRQLCADPRARAAVLADMDSIGKEAQLRGFEFAKAVTLVAEP
FTLENGLLTPTFKVKRPQAKAYFAKEISDMYAQLREAESAKPKL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcagcaggagcaggagcaacccccaatggacgccgcccggcgccgcctccgc
gcggtctccgctcacctccgcccgccggcgaccgccgcgggccgcggcctcgacgccaac
cccaccgccggcgagtacgcccatgtgcagggttacagtgtggttcttcccgagaagctg
caaactggaaagtggaatgtgtacagatctgcacggtcacctcttaggttgataaataga
tttcctgaaaatccagatatcggaacgctgcatgataattttgtgtatgcagttgagacg
tttagagattgtcgatacctgggaacaagaatccgcgaagacggaacggttggagattac
aaatggatgacatatggggaaacaagtacgagcaggactgcaataggttctggtctcatt
cactatggaatacatgaaggtgcacgcattggtctgtattttataaacagacctgaatgg
atcatagttgaccatgcttgtgctgcatactcatatgtatctgtgccactttatgacacc
cttggtccagatgcagttcaattcattgtgaaccatgccacagtagaagttattttctgt
gtgcctcaaacactaagcactctgttaagctttataactcaaatgccatgtgttcgtctt
atagtggtagttggtggagaagatgttaagattccacccacacccacaaatactggagtg
caaattataacttaccgcacgctacacaatcagggaaagatgagccctcaacctttccaa
cctccaaaacctgatgacgttgctactatttgttacacgagtggtaccacaggtactcca
aagggagctgttctttctcatgagaacttaatcgcaaatgtagcagggtcaagcctggga
attagattttacccctctgatgtgtatatttcttatttacccctcgctcacatctacgag
agagctaaccaggttgcgttgcttcataatggtgttgccattggattctaccaaggggat
aatttgaagctgatggatgatctggctgctttgagaccaacagtatttgcaagtgttcct
cggttatataacagaatttatgcagcaattacaaatgctgtgaaggaatctggtgggctg
aaagaaagactgtttcatactgcatacaatgccaagaggcaagcaattcttaatggacga
aatccatcgccaatgtgggacaagttggtgtttaacaaaataaaagctaggcttggtgga
cgagtgagactcatgacttcaggtgcttctccattgtcatcagatgtcatggaattctta
aggatatgctttggtggtgaagttcttgaaggctatggaatgacagagacatcttgtgtc
atctctacaatggatattggtgataagctaattggtcatgttggatccccaaacccttct
tgcgaggttaaacttgtggatgtcccagaaatgaattatacttccgaggatcaaccatat
cctcgtggggaaatctgtgctaggggacctataattttccgtggctattataaagatgaa
gttcaaacaagagaggtcattgatgaagatggttggttacacactggagacataggtttg
tggctgcctggagggcgtttaaaaattatagataggaaaaagaacattttcaagttagct
caaggagagtacatagctccggagaagatcgagaatgtctatgctaagtgcaagttcatt
gctcaatgctttgtatatggtgatagtttcaattcttccctagttgccattgtagcagtt
gaacctgaggtgttgaaggcttgggctgcatcagaaggaattcagtacgaggacttaaga
cagctctgtgctgatcctagagcaagagccgcggtcctggctgacatggattccatcgga
aaggaagcgcagctaagaggttttgaatttgctaaagctgttacccttgttgctgaacca
ttcacattggaaaatggtctcctcaccccaactttcaaggtcaaaaggccgcaagctaag
gcatactttgcaaaagaaatctcagatatgtacgcgcaattgcgagaggcagagtcagct
aagccgaagctatag
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