Panicum hallii (Hall's panicgrass): 112889396
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Entry
112889396 CDS
T07366
Name
(RefSeq) phytoene synthase, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00906
Carotenoid biosynthesis
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
Module
phai_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112889396
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
phai01006
]
112889396
Enzymes [BR:
phai01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
112889396
Prenyltransferases [BR:
phai01006
]
Terpene biosynthesis
Squalene/phytoene synthase
112889396
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GFIT
Motif
Pfam:
SQS_PSY
MU2_FHA
Motif
Other DBs
NCBI-GeneID:
112889396
NCBI-ProteinID:
XP_025811783
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Position
4:206412..209725
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AA seq
413 aa
AA seq
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MAIILVRAASPGLSDAVRDIHHHGSLQCSSLLKRRVPARRWMLCSLRYACLGLEPGEIGR
TSAVYSSLAVNPAGEAVVSSEQKVYDVVLKQAALLKRQLRTPLLDVRPQQLDMPRNGLKE
AYARCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTALDR
WEKRLEDLFAGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKARYKNFDELYMY
CYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDARRGRVYL
PQDELAQAGLSDEDIFNGVVTNRWRNFMKQQIKRARMFFEEAERGVTELSQASRWPVWAS
LLLYRQILDEIEANDYNNFTKRAYVGKGKKLLALPVAYGKSLLLPVSLRNSQT
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggccatcatcctcgtacgagcagcgtcgcccgggctctccgacgccgtccgggacatc
caccaccatgggagcctccagtgctcctccctgctcaagaggcgggtgccggcacgccgc
tggatgctctgctcgctcaggtacgcgtgccttggcctcgagccgggggagattggccgg
acctccgccgtgtactccagcctggccgtcaacccggcgggagaggccgtcgtctcgtcc
gagcagaaggtctacgacgtcgtgctcaagcaggcggcattgctcaagcgccagctgcgc
acgcccctccttgacgtcaggccccagcagctggacatgccgcgcaacggcctcaaggag
gcctacgcccgctgcggcgagatctgcgaggagtatgccaagactttttacctcggaact
atgttgatgacagaggagcggcgccgcgccatatgggccatctatgtgtggtgtaggagg
acagatgagctcgtagatgggccaaacgccaactacattacgccaacagctttggaccgg
tgggagaagagactagaggatctattcgcgggacgcccttacgatatgcttgatgccgct
ctttctgataccatctcaaggttccccatagacattcagcccttcagggacatgattgaa
gggatgcggagcgaccttagaaaggcgaggtataagaacttcgacgagctctacatgtac
tgctactacgttgctggaactgtgggattaatgagtgtacctgtgatgggcatcgcacct
gagtctaaggcaacaactgaaagcgtgtatagtgctgccttggctctcggaattgcgaac
caactcacaaatatactccgggatgtaggagaggatgctagaagaggaagggtatattta
ccacaagatgaactggcacaggcagggctctctgatgaggatatcttcaatggtgtcgtc
acaaaccgatggagaaacttcatgaagcagcagatcaagagggccaggatgttctttgag
gaggcagagagaggggtgactgagctctcacaggctagcagatggccagtatgggcctcc
ctactgttgtaccggcaaatcctggatgagattgaagcaaacgactacaacaacttcaca
aagagggcatatgtcgggaaagggaagaaactgctagcgcttcctgttgcatatgggaag
tcgctactgctaccggtttcactgagaaatagccagacctag
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