Panicum hallii (Hall's panicgrass): 112890350
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Entry
112890350 CDS
T07366
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
112890350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phai03000
]
112890350
Transcription factors [BR:
phai03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112890350
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
112890350
NCBI-ProteinID:
XP_025813040
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Position
4:complement(11380223..11382218)
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AA seq
388 aa
AA seq
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MEEALCDQLFSDVDGDLMMHHPSDADDLLGILEAWEDCVTGGGSTPRGAKVPQATDAAVA
TSNPAPASGNVRRLGDREDATMRAAPKRRRCSPAVSSSDAAATSDDGAANNNTSHITVER
NRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLQSLEAKKQRKAYTDQ
VLSPRPPPACCSPRPPLSPRPPLPPLKSTPPISPRPSVPISPRTPPGPGSPYKVRRQPPL
PLPLSPPGSAYTSPARTPTREPSPASSSYLPSLDKIAAELCAYAAGTNKQQQRQALLPAA
TSGGAVVLLPDVRVEFSGANLVVKTVSHREPGQAVKVIAALEGRSLEILDAKISTVDDTA
VNSFTIKIGIECELSAEELVQEIQQAFS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcactgtgcgatcagctcttctccgacgtcgacggcgacctgatgatgcac
cacccctccgacgccgacgacctcctcggcatcctcgaggcgtgggaggactgcgtcacc
ggcggtggtagtactccccgcggcgctaaggtgccgcaggccactgacgccgcagtggca
acgtccaatcccgcaccggcttcggggaacgtccggcggctgggtgaccgggaagacgct
acgatgcgagcggcgccaaagaggcggaggtgctcgccggcagtgtcgtcgtcagatgca
gcggcgacgagcgacgacggtgcggcgaataataacacgtcgcacatcaccgtggagcgc
aaccggaggaagcagatgaacgagcacctcgccgtgctgcgctcgctcatgccctgtttc
tacgtcaagcgaggagaccaggcatccatcatcggaggggtggtggactacatcaaggag
ctgcagcaagtgctgcagtcgctggaggccaagaagcagcgcaaggcctacaccgaccag
gtcctcagcccgcggccgccgccggcttgctgcagcccgcggccaccgctcagcccacgg
ccgcccctcccgcctctcaagtccacgccgccgatcagcccgcgaccctccgtcccaatc
agccccaggacgccgccgggtcccggcagcccgtacaaggtccgcaggcagccgcccctg
ccgctgcccctgtccccacctggctcggcgtacacgtccccggcgaggacgccgacccgc
gagccgagcccggcgtcgtcttcgtacctgccgtcgctggacaagatcgccgccgagctc
tgcgcctacgccgccggcaccaacaagcagcagcagcggcaggctcttcttcccgcggcg
accagcggtggggcggtggtcctcctcccggacgtgagggtggagttctccggcgccaac
ctggtggtgaagacggtgtcgcaccgcgagccggggcaggccgtcaaggtcatcgcggcg
ctcgagggccggtcgctggagatcctcgacgccaagatcagcaccgtcgacgacaccgcg
gtgaactccttcaccatcaagattggaatcgagtgcgagctcagtgctgaagagctggtg
caggagattcagcaagcgttctcgtaa
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