KEGG   Panicum hallii (Hall's panicgrass): 112895594
Entry
112895594         CDS       T07366                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112895594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phai03041]
    112895594
Spliceosome [BR:phai03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112895594
 Complex B
    112895594
 Complex C
   U2 SnRNP specific factors
    112895594
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 112895594
NCBI-ProteinID: XP_025819347
LinkDB
Position
5:complement(12460495..12468062)
AA seq 509 aa
MASTVLEATRAAHEDLERLERLAVRELQRDPANARDRLFQSHRVRHMLDLVVSTSDKLVE
IYEDKDNARKDEINTHLTAPTQTLLFSKYYERLKEIRDYHRRNPSARFISTTDDYEELLK
EEPVIEFTGEEAFGRYLDLHELYNEFINSKFGSPMEYSAYVGSFSQIEKIPQSHKTTRQY
REYLEHILEYLTSFLYRIEPLQDIEKIFSKLESEFEERWMNEEVPGWGNKSTEKESEAED
PEIDLDYYSTVEELVELGPEKLKQALAARGLKSGGTVQQRAERLFLLKHTPLEQLDRKHF
AKVPRTKDVSNTASDGNNVKDDLKKEIALMEVKMRRLCELLDEVFVRTKENAEKKLTLTY
EEMEAEREEEEVQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NHSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIQEAKGLWEKIQARQGLNKWR
PDLEEEYEDQEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggcgtcgacggttctggaggcgacgcgggcggcgcacgaggacctggagaggctggag
cggctcgcggtgcgcgagctgcagcgggaccccgccaacgcgcgcgaccgcctcttccag
tcccaccgcgtccgccacatgcttgacctcgtcgtctccacctccgacaagctcgtggaa
atctatgaggacaaggacaatgcaaggaaggatgagatcaacacacatcttactgcaccc
acgcaaactttactgtttagcaagtactatgaaaggctcaaagagatccgtgattatcat
aggcggaacccttcagcccgtttcatcagtacaactgatgattacgaagagcttctgaag
gaggaaccagttattgaattcaccggcgaggaagcttttggccgttatctagatttgcat
gagctttataatgagttcataaattccaagttcggatcaccaatggaatactcggcttat
gttggcagtttctcccagattgagaagatcccgcagagccataaaactacaagacaatac
agagaatacttggaacacattctggaatatctgacgtcatttttgtatcgaatagaacca
ttgcaggatattgagaagattttttctaagttggaaagtgaatttgaggaacgatggatg
aacgaagaagtacctggttggggaaataaaagcacagaaaaagagtctgaggcagaagat
cctgaaatagaccttgattattacagcacagtggaagaacttgttgagcttggtccagaa
aagttgaaacaggctttagctgctcgtggtttgaagagcggtggtactgtccaacagcgt
gcggagcggcttttcttgttgaagcatacacctttggaacagctggaccggaagcatttt
gccaaagttccacgtactaaagatgtctcaaacacagcttccgatggcaacaatgtcaag
gatgatttgaagaaggaaatcgcactgatggaagtaaagatgaggcgcctttgtgagctc
ctagatgaggtttttgtgcggacaaaggaaaatgctgagaagaaactcactttgacatat
gaagagatggaagcagaacgggaagaggaggaggtacaggctgacactgagagtgatgat
gaagagcaacaaatctacaaccctctcaaattgccgatgggttgggatggcaagcctatc
ccctattggttatacaagctacatggccttgggcaggaatttaagtgtgagatatgtgga
aaccacagttattggggacgaagggcctatgagcgtcatttcaaagaatggcgtcatcag
catgggatgcgatgccttggtatccctaatactaagaatttcaatgaaatcacatcgatc
caggaggcaaaagggctctgggaaaaaatacaagcgcgtcaagggctgaacaagtggcgg
ccagacctggaagaagagtacgaagatcaagagggcaacatctacaacaagaagacctac
actgacctgcagcggcaaggcctgatctag

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