Panicum hallii (Hall's panicgrass): 112895947
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Entry
112895947 CDS
T07366
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112895947
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112895947
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112895947
03019 Messenger RNA biogenesis [BR:
phai03019
]
112895947
03041 Spliceosome [BR:
phai03041
]
112895947
Enzymes [BR:
phai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112895947
Protein phosphatases and associated proteins [BR:
phai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
112895947
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112895947
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112895947
Spliceosome [BR:
phai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112895947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
112895947
NCBI-ProteinID:
XP_025819747
LinkDB
All DBs
Position
5:complement(38619288..38624567)
Genome browser
AA seq
324 aa
AA seq
DB search
MMARASTGAMDAAAVDEVLRRLVEGGRGGRQVQLSEAEIRQLCVEAKQVLLAQPNLLRIH
APVKICGDIHGQFVDLLRLFDLGGYPPASTYIFLGDYVDRGKQSLETICLLLAYKLKYPD
NIYLLRGNHEDAKINRVYGFYDECKRRFNVRLWKIFCDCFNCLPMAALIDDKVLCMHGGL
SPELNSLDQIKDIERPTEIPDYGLLCDLLWSDPSPDTEGWGESDRGVSCTFGADKLVEFL
EKNDLDLVCRAHQVVEDGYEFFAERRLVTIFSAPNYCGEFDNAGALLSIDESLMCSFQIL
KPKETGAPHSRKPLPNKTPKGENV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcgggcgtcgacgggggcgatggacgccgcggcggtggacgaggtgctgcgg
cgcctcgttgagggcggccgcggcgggaggcaggtgcagctgtcggaggccgagatccgc
cagctctgcgtcgaggccaagcaggtgctgctcgcgcagcccaatctcctccgcattcac
gcgcccgtcaagatctgcggtgatatccacggtcagtttgttgatcttctgaggctattc
gatttgggtggttatcctccagcttcaacttatattttccttggagactatgtggataga
ggcaaacaaagcttagaaaccatatgtctgcttctggcatacaagttgaagtaccctgat
aatatataccttttaagggggaaccatgaagatgcaaaaattaacagagtatacggtttc
tatgatgaatgtaaaaggagattcaatgttcgactgtggaagatattctgtgattgcttc
aactgcttgcctatggcagcacttattgatgacaaagtactatgcatgcatggtggcctc
tcacctgaattgaatagcttggatcaaataaaagatattgagaggcctaccgaaattcct
gactatggccttctgtgtgatctcctttggtctgatcctagtcctgatacagaagggtgg
ggggagagtgatagaggtgtttcttgcacttttggtgcagataagcttgtagaattcttg
gagaagaatgatcttgaccttgtgtgccgagctcatcaggtggtagaagatggctacgag
ttctttgcagagagaagattagtgacgatcttttcagctccaaactattgcggtgaattt
gacaatgcaggtgctctattgagcatagatgaaagcttaatgtgttcttttcagatattg
aagccaaaggaaacaggtgcaccacattcaaggaaaccccttccaaacaagacaccaaaa
ggagaaaacgtctaa
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