Panicum hallii (Hall's panicgrass): 112902739
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Entry
112902739 CDS
T07366
Name
(RefSeq) adagio-like protein 3 isoform X1
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112902739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112902739
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112902739
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_5
Kelch_1
PAS_9
Kelch_6
NANM
PAS
PAS_3
F-box-like
F-box
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
112902739
NCBI-ProteinID:
XP_025827687
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Position
8:complement(38807192..38811058)
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AA seq
627 aa
AA seq
DB search
MFDDGAAGNRGAVAVKRMRLWEEDEGVEVVGEGEEGMEVDGDEEEGWAWGAPAAGVGEQR
AAAIVVADAAEADFPVIYVNAAFEAATGYRAHEVLGRNCRFLQFRDPRAQRRHPLVDPMI
VSEIRRCLNEGIEFQGELLNFRKDGAPLYNRLRLIPMHGDDGSVTHVIGIQLFFEANIDL
SNISYPVYKQQSNYRPSIQDLSSASHEHTPKIQSLDYCAILQLSDEVLAHNILSRLSPRD
VASIGSVCTRMHELTKNDHLRKMVCQNAWGRDVTVRLEMSTKMLRWGRLARELTTLEAAS
WRKFTVGGRVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLEAARPEWRRVKVS
ASPPGRWGHTLSWLNGSWLVVFGGCGQQGLLNDVFVLDLDAQQPTWREVASEGPPLPRSW
HSSCTLDGSKLVVSGGCTESGVLLSDTFLLDLTKEKPAWREIPTSWSPPSRLGHTLSVYG
TTKLFMYGGLAKSGSLRLRSSDAYTMDVGEDSPQWRQLATTGFPNVGPPPRLDHVAVSLP
CGRIIIFGGSIAGLHSPAELFLIDPAEEKPTWRILNVPGQPPKFAWGHSTCVVGGTRVLV
LGGHTGEEWILNELHELCLASRPDEDE
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgacggcgcggcggggaatcgcggcgcggtggcggtgaagcggatgaggctg
tgggaggaggacgagggggtggaggtggtgggggaaggggaggaggggatggaggtggac
ggggacgaggaggaggggtgggcgtggggggcgccggcggcgggggtcggggagcagagg
gcggcggcgatcgtggtggcggacgcagcggaggccgacttccccgtcatctacgtcaac
gccgccttcgaggccgccacggggtaccgcgcccacgaggtgctcgggcgcaactgccgg
ttcctgcaatttcgggatccacgtgcgcaaaggcggcatcctcttgttgatcccatgatt
gtttcagagattcggcgatgcctcaatgaggggattgaattccaaggcgagctgctcaat
ttccggaaggatggtgctccactttataacagattaaggctcattcctatgcatggggat
gatggatctgtgacacatgttattgggatccagctattctttgaggcaaacattgatctc
agcaacatatcatatccagtgtataaacaacagtccaactacaggcctagcattcaagat
ctgagctcagcttctcatgaacatactccaaaaatccagagtttagactactgtgctatc
ctccaattgtcagacgaagttctagcacacaacattttatctcgcctgtcgccaagagat
gttgcatcgattggatcagtctgtaccagaatgcatgaactaaccaagaatgatcacctg
aggaagatggtctgccagaacgcatggggaagagatgtcactgtcaggcttgagatgagc
accaagatgttgcgatggggtcgccttgcaagagagctaacaacccttgaggctgcctca
tggagaaagttcactgttggaggacgcgtggagccttcccgttgcaacttcagtgcatgt
gctgttggtaatcgccttgtcctgttcggaggggagggagtcaacatgcagcctatggat
gacacatttgtgcttaacttggaggctgcaaggccagaatggcgacgtgtcaaggtctct
gcctccccacctggccggtgggggcacactctatcatggctgaatgggtcatggctggta
gtatttggaggctgtggacagcaaggtttgctcaacgatgtcttcgtccttgacctcgat
gctcagcagcctacatggagggaggttgcaagtgagggtcctccactgccacggtcttgg
cacagctcatgcactttggatggttcaaagcttgttgtctcaggtgggtgcactgaatcc
ggagttcttctcagcgacaccttcctccttgacctcacaaaggaaaaaccagcatggagg
gagattcctacatcctggtctccgccatcccgccttggccacaccttgtctgtctatggt
acaaccaaactattcatgtatggtggactggcaaagagcggctctctccggctgcgctcc
agtgacgcctacacgatggatgtcggcgaagacagtccccaatggaggcagctggctaca
accgggttcccgaatgttggtccaccgccaaggcttgatcatgtcgctgtgagcctgccg
tgtgggagaatcatcatatttggtggctcgattgctggcctgcactccccagcagagctg
ttcctgatcgaccccgctgaggagaagccgacatggaggatactgaacgtccctgggcag
ccaccgaagttcgcctggggacacagcacctgtgtggtgggtggaactagagttctggtc
ctgggaggccacactggggaggagtggatcctgaatgagctccatgagctttgccttgca
agcaggcccgacgaagacgagtga
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