Parasphingorhabdus halotolerans: HF685_15890
Help
Entry
HF685_15890 CDS
T07423
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
phao
Parasphingorhabdus halotolerans
Pathway
phao00190
Oxidative phosphorylation
phao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
HF685_15890
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF685_15890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phao03019
]
HF685_15890
Enzymes [BR:
phao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
HF685_15890
Messenger RNA biogenesis [BR:
phao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HF685_15890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QJB70554
UniProt:
A0A6H2DQD9
LinkDB
All DBs
Position
3235090..3237291
Genome browser
AA seq
733 aa
AA seq
DB search
MDNLASERNSLADNEGGNGVPFLGDAQLADGSERYFNRELSWLGFNERVIEEAQNSSHPL
LERLRFLSISGNNLDEFFMVRFAGLVGQYRQNIEERSADGLTAVQQLQAIATQADKLLNN
QQKVWNELTGLLAKEDIFVQSVDVLDETDRTWLRRHFIDQIFPVLTPQALDPAHPFPFIP
NKGLSLVFDLVRKSDKRGIRELVMIPSGLPRFIRMPGDIATYVSVESVIRYHSDLLFPGY
EVSSGGLFRIIRDSDIEVEEEAEDLVRYFRSAIKRRRRGDVIRLEIGPDLSEPVTTMLRE
HLLDAGTAESRIDGLVGLGDLERLVEEDRPDLKFVPYSPRFPERIREHGGDCFAAIRDKD
ILVHHPYESFEVVIEFLRQAAADPDVVAIKQTLYRAGKQSAVIRALIDAAEAGKSVTAIV
ELKARFDEEQNLVWASELERAGVQVVYGFIEWKTHAKISMVVRKEAEGYRTYCHFGTGNY
HPITAKIYTDLSFFTADPKAARDAAQLFNYITGYVEPEKLEMISMSPRYLRNDIMALIDQ
EIASERAGKPGMIWAKMNSLVDPALIEKLYAASDAGVEIDLVIRGICCLRPGVPGMSDNI
RVKSVVGRFLEHSRIWAFGNGRDLPNDGAKLYISSADWMPRNLDRRVEYMMPIENKTVHD
QILDQVMVANLIDDEQSWELNSDGSYTRVVPSDNPFNLHRYFMTNPSLSGRGKALKKSNA
VPRLSLRRRKKKV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggataatctggcatcagaaagaaacagtcttgctgacaatgagggcgggaatggcgtg
ccgtttcttggtgatgcgcaattggcagacgggtcggaacgctattttaatcgtgaactg
agttggctcggctttaacgagcgggtgattgaagaggctcagaatagctcgcacccgctg
cttgagcgcctgcgttttctctcaatctcgggcaataatctcgatgagtttttcatggtt
cgctttgccggactggtcggtcaatatcggcagaatatcgaggagcgttcagcggatgga
ttaactgcggtgcagcagttgcaagcaatcgcaacacaggccgataaattattgaataat
cagcagaaagtctggaatgagctgaccggactattggcgaaagaagatatttttgttcag
tcggttgatgtgcttgatgaaaccgatcgaacctggcttcgtcgccactttattgaccag
atttttccagtcctgacgccgcaagctttagacccggcccacccgttcccgtttattcca
aacaagggactcagtctggttttcgatcttgttcgcaaatccgacaagcgcggtatcaga
gaattggtgatgatcccgtccggattgccgcgcttcatcagaatgcccggcgacattgcg
acatatgtatctgtcgagtcggtcattcgatatcattccgatttgctgttccccggctat
gaagtttccagcggcgggctgttccggatcattcgagatagtgatattgaagtcgaggaa
gaggcagaagacctcgtacgctacttccgtagtgcgataaaacgccgccgtcggggcgat
gtaatcaggctggaaatcggaccggatttatcggaacccgtcactacgatgttacgggag
catttgcttgatgcgggaactgcggaaagccggattgatggtctggttggcctgggtgat
cttgagcggctggttgaggaagatcgccccgatctcaaattcgtcccctatagtccgcgc
tttccggaacggatcagggaacatggaggtgattgttttgcagcgatccgcgacaaggac
atattggtgcatcacccttatgaatcctttgaagtggttatcgaatttttgcggcaggcg
gctgcagaccctgatgtggtggcgatcaaacaaacgctctatcgcgctggcaagcaatca
gcggttatccgtgcgctgattgatgcggcggaagcgggtaaatcggttaccgccatcgtc
gagttaaaggcacgatttgacgaagaacaaaatttggtgtgggccagcgagttggagcgt
gcaggcgtgcaggtggtctatggctttatcgaatggaaaacccatgccaaaatatcgatg
gtcgtgcgcaaggaagcggaaggatatcgcacctactgccactttggcaccggcaattat
cacccgattaccgcgaaaatttataccgatctgagcttctttactgcggacccgaaagcg
gcccgcgatgcggcgcagttattcaattatatcaccggttatgtcgagccggaaaagctc
gagatgatttcgatgtcaccgcgttatttgcgcaacgatattatggcgttgattgatcag
gaaattgccagcgaacgggccggcaaacccggaatgatctgggcaaaaatgaactcgctg
gttgatccggccttgatcgaaaagctttatgcggcgagcgatgccggtgtcgagattgat
ttggtaattcgtggaatatgttgcttgcggcccggcgttccgggcatgtctgataacatc
cgggtaaagtcagtggtcgggcgtttcctcgagcacagtagaatttgggcttttggcaat
ggccgggatttgcctaatgacggcgcgaagctctatatttcatcggcggactggatgccg
cgcaatctggatcggcgggttgaatatatgatgccgatcgagaataaaaccgtccatgac
caaattctcgatcaggtgatggtcgccaatctcatcgatgacgaacagagctgggagctt
aattctgatggcagttacacgcgcgtggtgccttcggataacccgtttaatctgcaccgc
tattttatgaccaatccctctctttccgggcgaggcaaggcgctcaagaagagcaacgcg
gttccgcgtctcagcttgcgtcgccgcaagaaaaaggtctga
DBGET
integrated database retrieval system
