Peptoniphilus harei: NCTC13077_01489
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Entry
NCTC13077_01489 CDS
T05838
Symbol
ykoD_2
Name
(GenBank) Putative HMP/thiamine import ATP-binding protein YkoD
KO
K01552
energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
phar
Peptoniphilus harei
Brite
KEGG Orthology (KO) [BR:
phar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phar02000
]
NCTC13077_01489 (ykoD_2)
Transporters [BR:
phar02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
NCTC13077_01489 (ykoD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
nSTAND3
AAA_22
AAA_29
RNA_helicase
NACHT
AAA_16
NB-ARC
AAA_23
Mg_chelatase
DUF5906
nSTAND1
Rad17
PRK
G-alpha
AAA_25
MCM
AAA_7
AAA_18
DUF87
cpYpsA
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
VEJ35284
LinkDB
All DBs
Position
1:complement(1549547..1550938)
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AA seq
463 aa
AA seq
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MIEIRELSFKYKGGSDYSLKDINLKIKKGECILLCGRSGCGKSTLLKLMNGIIPEFYDGD
ISGSVMVNGMNTFTTPIYKLSNNVGSVFQNPKTQFYTTNTTDEIAFGLENYGIEREVINK
RIEEVEKELHLENLMNKNIFNLSGGEKQKIAIASIYALNPEIFILDEPSSSLDIESMKEL
SLTIKKLKSLGKTIIIAEHRLWYLKDIVDRAIYLEDGKIIREYSMDEIENLSEDERIRTG
LRHSDYKAIERFDDFETSNKGTLLVLKDLIFKRNTKIILSIEDLNFCYGNIIGIVGENGI
GKSTLAKIICGLYKENKGKILKDDENLNIKSRLNESLLIMQEVNCQLFTDTVKDEIVLTS
NIKDDNALDTWLKDMELKNISDRNPHTLSGGQKQRVIILSALLSDKKILFFDEPTSGLDY
RNMKIVAKNIKKVKEEDKLILIISHDVEFLESVCDKVIDFTYL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattagagaattaagttttaagtataagggaggatctgattactcattaaaa
gatataaacttgaaaatcaaaaaaggggaatgcattcttctatgtggtaggagtggttgt
ggaaagtccactctattaaagcttatgaatggcataatacctgagttttatgatggggac
atttctggcagtgttatggtcaatggtatgaatacatttaccacaccaatttataaatta
tctaataatgtaggctcggtttttcaaaatcctaaaacacagttttatacaaccaataca
accgatgaaattgcttttggtttagaaaattacggaatagaaagagaagtaattaacaaa
aggattgaagaagttgaaaaagagcttcatcttgaaaacttgatgaataaaaatatattc
aatctttctggaggagaaaagcagaagattgctatagcaagcatttacgcattaaaccct
gagatatttattcttgatgaaccatcttcaagcttagacatagagtcaatgaaagaatta
tcgcttacaataaaaaagcttaaatctttaggaaaaactattattattgcagaacacagg
ttgtggtatttaaaagacattgttgatagagcaatatacttagaggatggaaaaatcatc
agagaatatagtatggatgaaattgaaaatctaagtgaagatgaacgaataagaacagga
cttaggcattctgattataaagctattgaaagatttgatgattttgaaacttcaaataaa
gggactttattagtgctaaaagatctaatattcaaaagaaataccaaaataattttgtcc
attgaggatcttaatttttgctatgggaatattattgggattgttggagaaaatggaatt
gggaagtctacattagcaaaaattatatgtggcttatacaaagaaaataaaggtaaaatt
ttaaaagatgatgagaatttaaatataaaaagtaggctaaatgagagcctgcttattatg
caggaagtgaactgtcagttattcacggacactgtcaaagatgaaatagtattaacatca
aatattaaagatgataatgctttagatacttggttaaaagatatggagttaaaaaatatc
agtgataggaatcctcacaccttgtcaggaggacaaaaacagagagtaattatcttatca
gctttactatcagacaagaaaattctatttttcgatgaaccaaccagtggattggactat
agaaatatgaaaatagtagctaaaaacataaagaaagtaaaagaagaagataagttgatt
ttaataatatcccatgatgttgagtttttagagtcagtttgtgataaagtgattgatttc
acttatttatga
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