Planococcus halocryophilus: BBI08_13075
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Entry
BBI08_13075 CDS
T04473
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
phc
Planococcus halocryophilus
Pathway
phc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBI08_13075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phc03021
]
BBI08_13075
03400 DNA repair and recombination proteins [BR:
phc03400
]
BBI08_13075
Enzymes [BR:
phc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBI08_13075
Transcription machinery [BR:
phc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBI08_13075
DNA repair and recombination proteins [BR:
phc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBI08_13075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ANU14727
UniProt:
A0A1C7DTJ3
LinkDB
All DBs
Position
118212..121766
Genome browser
AA seq
1184 aa
AA seq
DB search
MVGQLVQYGQHRQRRSFSRISEVLDLPNLIEIQSSSYEWFLEEGLREMFRDISPIEDFTG
NLSLEFVDYSLAEPKYPVDESKERDVTYAAPLRVKVRLHNKETDEVKEQDVFMGDFPLMT
ETGTFVIDGAERVIVSQLVRSPSVYFHDKTDKNGKKGFGATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLLGDNEYLQNTLEKDNTESTEKALLEIYERL
RPGEPPTVESAKSLLYSRFFDPKRYDLANVGRYKMNKKLHIKNRLFNQTIAETLADPETG
EILVEAGTLIDRRVLDRLIPNLENGVGFHTVSQVGGVLEGEVTLQSIKIYAPNNEDQKEI
TVISNAYIEDKIKHVTPADIISSISYFFNLLYGVGNTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSINDTQAIVPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINTLSTFAKVNKFG
FIETPYRRVDAESGVVTKHIDYLTADEEDNYVVAQANSKLNDDGSFVEEGIVARFRGENT
IYKRGSIDYMDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLLNPEAPFVGTG
MEHLAARDSGAAVVAKNDGIVELVEAKEIAVRRIEVVDGNEVRGDLDTYKLQKFVRSNQG
TSYNQRPIVKVGDRVSKRDILADGPSMERGEMALGRNVLVAFMTWDGFNYEDAIIMSERL
VKDDVYTSVHIEEYESDSRDTKLGPEEITRDIPNVGEDALRNLDDRGIIRVGAEVKDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKIFNREDGDEL
PPGVNQLVRAYIVQKRKISVGDKMAGRHGNKGVISRILPEEDMPFMPDGTPVDIMLNPLG
VPSRMNIGQVLELHLGMASRSLGIHMASSVFDGANEEDVLETMEESGMPRDGKTILYDGR
SGEAFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGESVPEPSVPESFKVLIKELQSLGMD
VKMLTIDDEEIELRDLDEEEDLQPADSLNILPIADTEAPVGTID
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
ttggtaggtcaactagttcagtacggtcaacatcgtcaacgcagaagtttttcgagaatc
agtgaagtgctggatcttccgaacttgattgaaattcaatcatcatcttatgaatggttt
ctcgaagaaggacttcgcgaaatgttccgagatatctcgccgattgaagatttcacagga
aatctatcgctcgagtttgttgattacagtctcgcggaaccgaagtatccagtcgatgaa
tcgaaggagcgcgacgtaacttatgcagcacctttgcgtgttaaagtacgtctgcacaac
aaagaaacagatgaagtaaaagaacaagatgtcttcatgggtgatttcccgttaatgaca
gaaacaggtacttttgttatcgacggcgcagaacgcgttattgtttctcagctagttcgt
tcgccgagtgtttatttccatgacaagacagataaaaatggtaaaaaaggctttggagca
actgttattccgaaccgtggagcatggttagaatacgaaacagatgcaaaagatgttgtg
tatgtaagaattgatcgcacacgtaaattaccggtaacggttcttttaagagcgcttggt
ttcggatctgatcaagaaatcatcgatttacttggagataacgaatatcttcaaaataca
cttgaaaaagataacacagagagcacagaaaaagcgcttcttgaaatttatgaacgcctg
cgtcctggtgagccaccaacagttgaaagtgcgaagagcttactatactcacgctttttc
gacccaaaacgctatgacttagcaaatgttggtcgttataaaatgaacaaaaagcttcat
attaaaaaccgtcttttcaatcagacaattgcagaaacattagcagaccctgaaacaggc
gaaattttagttgaagctggtacattaattgatcgtcgtgtactagatcgcttaattcca
aacttagaaaatggtgttggtttccatactgtttctcaagtaggtggcgttctagaaggt
gaagttactttacagtcgatcaaaatttacgcaccaaacaacgaagatcaaaaagaaatc
actgttattagtaatgcctatatagaagataagattaagcatgtaacaccggctgatatt
atttcttctattagttacttctttaaccttctttatggtgtcggaaacacagatgatatt
gatcatcttggtaaccgccgtctacgttcagtaggtgagcttttacagaaccaattccgt
atcggtttatctcgtatggagcgtgtagttcgtgaacgtatgtcgattaacgatacacaa
gcaatcgtacctcagcaattgatcaatatccgtccggttattgcatcaattaaagagttc
ttcggtagttctcagctttctcagtttatggatcaaaccaatccacttgctgaattgaca
cataaacgccgtctatcggcgcttggacccggtggtttaacacgtgaacgtgcaggcttt
gaagtacgtgacgttcactattcacattacggtcgtatgtgtccgattgaaacgcctgag
ggcccgaacattggattgatcaatacactctcaacatttgcgaaagtgaataagttcggt
ttcattgaaactccttatcgccgcgttgatgctgaatcaggtgttgttacaaaacatatc
gattacttaactgctgatgaagaagataactatgtagtggctcaagccaattcgaaattg
aatgacgatggttcatttgttgaagaaggcattgtggcacgtttccgcggggaaaacacg
atttataagcgcggcagcattgactacatggacgtttctccaaaacaggttgtttctgta
gcaacagcttgtatcccgttccttgaaaacgatgactccaaccgagcgttaatgggagcg
aacatgcaacgtcaagcagttccgttattaaatccggaagctccttttgtaggaactgga
atggaacatttggcagcgcgtgattctggtgcagctgtagtagcaaaaaatgatggtatt
gtagaattagtggaagctaaagaaatcgcagtccgccgtattgaagttgtggatggcaat
gaagtccgaggcgaccttgatacttacaaattgcaaaaattcgttcgttctaaccaagga
acaagttataaccagcgcccaatcgttaaagttggagaccgagtttctaaacgcgatatt
ctagccgatggaccttcaatggaacgcggagagatggcattaggaagaaacgtattggtt
gccttcatgacatgggatggctttaactacgaagatgcgattatcatgagtgaacgttta
gttaaagacgatgtttatacatctgttcatattgaagagtacgaatctgattcacgtgat
acgaaactagggccagaagaaattacgcgcgatatcccgaacgttggggaagacgcattg
cgtaacttggatgaccgtggaattatccgtgtcggagctgaagtgaaagatggagatatt
cttgttggtaaagtaacacctaaaggcgttacggaactaactgctgaagaacgtctttta
catgctattttcggcgaaaaagcacgcgaagttcgcgatacttcattgcgagtgcctcac
ggtgctggcggtattgtattggatgttaaaatcttcaaccgtgaagatggagacgaacta
ccaccaggtgttaatcagctagtccgtgcatatatcgttcagaaacgtaaaatttctgtt
ggtgataaaatggctggacgtcacggaaacaaaggtgttatttcaagaatattacctgaa
gaagatatgccgtttatgcctgatggcacgccagtcgacattatgttgaacccacttggt
gtaccttctcgtatgaatatcggtcaggtacttgaattacaccttggaatggcttctcgt
tcacttggaattcatatggcttcatctgtatttgatggagcaaatgaagaagatgtgttg
gagacaatggaagagtcaggtatgccgcgcgatggtaaaacgattctctatgatggccgt
tctggtgaagcattcgataaccgtgtgtctgtaggaatcatgtatatgatcaaacttgcc
cacatggttgacgataaattgcacgcccgttctactggaccgtactcattggttactcaa
cagccattgggtggtaaagcacaattcggcggacagcgttttggtgagatggaagtatgg
gcacttgaagcatatggtgctgctcatacattacaagaaatcttaacggtgaagtcggat
gatgtcgtaggtcgcgtaaaaacttatgaagcaattgttaaaggtgaaagtgtgccggaa
ccaagtgtgccggaatcattcaaagtgttaattaaagagcttcaaagtttaggtatggac
gttaaaatgttaacgattgatgatgaagaaattgagttgcgtgatttggatgaagaagaa
gatcttcaaccagctgactcattaaatatcttaccgattgcagatacagaagcaccggtt
ggaacaattgattaa
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