Pedobacter heparinus: Phep_2562
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Entry
Phep_2562 CDS
T00978
Name
(GenBank) ATP dependent DNA ligase
Organism
phe
Pedobacter heparinus
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
ACU04766
UniProt:
C6Y054
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Position
2986750..2988357
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AA seq
535 aa
AA seq
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MKRFTKLIQQLEMSNKTNDKIAALVDYFNEADELDKPYVIAMFTGKRPKRPVSTALIRQW
ATALSGIPEWLFSECYHNVGDLSETIALVLPPASELSTRKLHEWINELALLNGKDDDDKK
TFILKAWDSLETQERFIFNKLISGNFRIGVSGKMLVNALARQTGTESSKIMHSIMGKWEP
SQISYQDLMAGAHVNTDSSWPYPFCLAYALEAEPGALGEPLEWQAEWKWDGIRGQIVKRN
GELFIWSRGEELVTEQFPELHFLKDELEDGTVLDGEILSVKDGKVQAFSLLQQRLNRKTI
SKAQLSDAPIGFFTYDLLEHKGRDLRSDALSLRRELLTKTIEDLLTKHVVLLSPVIEFKS
WAQLAKLRTISRDINREGIMLKKMDSLYHSGRKRGDWWKWKINPYTVDTVMIYAQKGSGR
RASFFTDYTFAVRDGEKLVTVAKAYSGLTDKEIKEVNAFVVKNAIEKFGPVRTVRPELVF
EIAFEGIAESKRHKAGLALRFPRIARWRKDKKADEINTLDDLKQLLQATLLPAKA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtttcactaaactcatacaacagctggaaatgagcaataagaccaacgacaaa
attgccgcgctggttgactattttaatgaagctgatgaactggataaaccttatgtaatt
gccatgtttaccggaaaaagacctaaaagaccggtaagcaccgccttgatcaggcaatgg
gccacagcattgagcggaattccggaatggcttttttcagagtgttaccacaatgtgggc
gacctgagtgagaccattgccctggtgctcccgcctgcatcggaacttagcacaaggaaa
ctccatgaatggatcaatgagctggctttactgaacggcaaagatgatgacgataaaaaa
actttcattttaaaagcctgggatagcctggaaacacaggaacgtttcatttttaacaaa
ctgatatctggcaatttcagaataggtgtatccggcaaaatgctggtcaatgcactggcc
agacaaaccggtacagaaagcagtaaaatcatgcacagcattatgggcaaatgggaaccc
tcgcagatcagttaccaggacctgatggcaggggctcatgtgaataccgacagctcctgg
ccctaccctttttgcctggcatatgcgcttgaagcggaaccaggtgcactgggcgaacct
ttggaatggcaggcagaatggaaatgggatggcatacgcggacaaattgtaaaacgcaat
ggcgagctttttatctggtcgcggggcgaggagctggtaactgagcaattcccggagctg
cactttttaaaagatgagctggaggatggaacagtactggatggagaaatactttctgta
aaagatggaaaagtacaggcatttagcttgctgcaacaaaggctaaacagaaaaaccatc
agtaaggcccagctaagcgacgccccgataggattctttacatacgaccttttggagcat
aagggaagagatttaagatcagatgccttaagtctgcgccgggaactgctgacaaaaact
attgaagatctgctcactaaacatgtagtgctcctgtcgccggttattgaatttaaaagc
tgggcgcaactggcaaaactcagaaccatatcgagggatatcaaccgtgaaggcatcatg
ttaaaaaaaatggattccttataccacagtggcaggaagcgcggcgactggtggaaatgg
aaaataaacccttatacagtggatactgtaatgatctacgcccagaaaggcagtggccgc
agggccagcttttttaccgattatacttttgctgtccgcgatggggaaaaactggttacg
gtagcaaaagcttattccggattaacagacaaagaaattaaagaagtaaacgcttttgtt
gtaaaaaatgcaattgaaaaatttggcccggtaagaactgttagaccggaactggtattt
gaaattgcatttgaaggaatagcagaaagcaaaaggcacaaagcaggtctggccctcagg
tttccgcgtattgcccgatggagaaaggacaagaaagcagatgagatcaatacccttgat
gatttaaagcaattgcttcaggctacattattgcctgccaaagcttaa
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