Porcisia hertigi: 94288535
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Entry
94288535 CDS
T10408
Symbol
JKF63_02433
Name
(RefSeq) hypothetical protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
phet Porcisia hertigi
Pathway
phet03018
RNA degradation
phet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
94288535 (JKF63_02433)
09123 Folding, sorting and degradation
03018 RNA degradation
94288535 (JKF63_02433)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phet03019
]
94288535 (JKF63_02433)
03041 Spliceosome [BR:
phet03041
]
94288535 (JKF63_02433)
Messenger RNA biogenesis [BR:
phet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
94288535 (JKF63_02433)
mRNA degradation factors
5'-3' decay
Lsm complex
94288535 (JKF63_02433)
Spliceosome [BR:
phet03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
94288535 (JKF63_02433)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
94288535
NCBI-ProteinID:
XP_067754615
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All DBs
Position
32:271989..272339
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AA seq
116 aa
AA seq
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MSYARRPITPIEILRNCRGKDVSIELADGETVNGTVMRTDRAMNVVIKQCTRTNADGKSF
WKSRECFVRGASVKNVRMTDSALVAVPVSVKRKATGGKGVDARKEKSAVGGKHSRK
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgcacgccgacccataactcctatagagatattgcgtaactgccgaggcaag
gatgtttccatcgaacttgccgatggggagacggtgaatggcactgttatgcgcaccgat
cgcgcaatgaacgtggtcatcaagcagtgcactcgtactaatgccgatggcaagtcattc
tggaagtcgcgcgagtgtttcgtacgcggggccagtgtaaaaaatgtgcgcatgacagac
agcgcacttgtagcagtgccagtctcagtgaaacgaaaggcgacaggcggaaaaggcgta
gatgcccgaaaagagaaatctgcagtaggtggaaagcattctcggaagtag
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