KEGG   Porcisia hertigi: 94289314
Entry
94289314          CDS       T10408                                 
Symbol
JKF63_03217
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
phet  Porcisia hertigi
Pathway
phet03030  DNA replication
phet03410  Base excision repair
phet03420  Nucleotide excision repair
phet03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:phet00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    94289314 (JKF63_03217)
   03410 Base excision repair
    94289314 (JKF63_03217)
   03420 Nucleotide excision repair
    94289314 (JKF63_03217)
   03430 Mismatch repair
    94289314 (JKF63_03217)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phet03032]
    94289314 (JKF63_03217)
   03036 Chromosome and associated proteins [BR:phet03036]
    94289314 (JKF63_03217)
   03400 DNA repair and recombination proteins [BR:phet03400]
    94289314 (JKF63_03217)
DNA replication proteins [BR:phet03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    94289314 (JKF63_03217)
  DNA Replication Termination Factors
   ELG1-RFC complex
    94289314 (JKF63_03217)
Chromosome and associated proteins [BR:phet03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    94289314 (JKF63_03217)
DNA repair and recombination proteins [BR:phet03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     94289314 (JKF63_03217)
  Check point factors
   HRAD17(Rad24)-RFC complex
    94289314 (JKF63_03217)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 Rad17 RCF1-5-like_lid AAA_16 AAA_assoc_2 Mg_chelatase RuvB_N nSTAND_NTPase5 AAA_19 AAA_11 AAA_lid_RFC1 AAA_30 nSTAND3 SLFN-g3_helicase DNAX_ATPase_lid AAA_25 AAA_5 RNA_helicase AAA_14 AAA_24 AAA_18 ABC_tran NPHP3_N SplA
Other DBs
NCBI-GeneID: 94289314
NCBI-ProteinID: XP_067756027
UniProt: A0A836HY95
LinkDB
Position
27:219542..220627
AA seq 361 aa
MSTSSTPWVEKYRPQTVGDIVGNTEAISRLQVISKQGNLPNLLLCGPPGTGKTTSMLCLA
RDLLLQSSEAGSGRNLSAGGAPKDILKDAVLELNASDERGLDVVREKIKLFAQTKKTLPK
KFFSSGEGLAQEERMVHLHKIVLLDEADSMTPAAQQALRRTMELHSSTTRFAFACNNSSK
IIEPIQSRCAVVRFKKLNDADILKRLVYVIQQENVSYTDDGLEALLYLAEGDLRQALNAL
QATHTGYRLVNAENVFKVCDQPHPVLVENIVTACVTKHNIEEAHKEMNRLLNRGYAPVDV
VGTFFKVIQSNARLFRSELQQLEVLKIVGEATMRIAEGVGTALQLAAMLARMIAVVERSE
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtccacttcgagcacgccgtgggtggagaagtaccgtccgcagacggtgggagacatc
gtgggtaacacggaggccatttcgcggttgcaggtgatatcgaaacaaggcaatttgccg
aacctgctcctctgtgggccgcctggcaccggaaagacgacgagcatgctctgcctcgcg
cgcgatttgctgcttcagagcagcgaggctggtagcggaaggaatttgtccgctgggggg
gcacccaaggacatcctcaaggacgccgtgctagagctgaacgccagtgacgagcgcggt
ctagacgtggtgcgggagaagatcaaactgtttgcccagacaaagaagacgcttccgaag
aagttcttttcttcaggtgagggtctcgcgcaagaagagcggatggtgcacctacacaag
attgtgctcctggatgaggcggatagcatgaccccagccgcccagcaggcgttacgccgc
acaatggagctgcacagcagcacaacgcgctttgcctttgcgtgcaacaatagcagtaaa
attattgagccgatccagtctcgctgcgctgtcgtccgcttcaaaaagctcaatgacgca
gacatattgaagcggttggtgtacgtgattcagcaggaaaacgtttcctacacagacgat
ggactagaggcgctgctgtaccttgccgagggagaccttcggcaagccttgaatgccctc
caggctacacacacggggtacagactcgtaaacgccgagaacgtcttcaaagtgtgcgac
cagccgcatccggtgcttgtcgagaacattgtcaccgcgtgcgtgactaaacacaacatt
gaagaagcacacaaggaaatgaatcgacttctcaaccgcggctacgcaccggtggacgtg
gttggcacttttttcaaggtcatccagtccaacgcacgcctttttcgcagtgagctgcag
cagctggaagtcctgaaaatagtgggcgaggcgacgatgcgtatcgctgagggtgtgggc
accgcgctacagctggctgcaatgctcgcacgtatgattgccgtagtcgagaggagtgaa
tcatag

DBGET integrated database retrieval system