Porcisia hertigi: 94291103 Help Entry 94291103          CDS       T10408                                  Symbol JKF63_05056 Name (RefSeq) hypothetical protein   KO K12604   CCR4-NOT transcription complex subunit 1 Organism phet  Porcisia hertigi Pathway phet03018   RNA degradation Brite KEGG Orthology (KO) [BR:phet00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     94291103 (JKF63_05056)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:phet03019]     94291103 (JKF63_05056) Messenger RNA biogenesis [BR:phet03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      94291103 (JKF63_05056)   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      94291103 (JKF63_05056) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819 ARM_Cnot1 NOT1_connector DUF4549 Motif Other DBs NCBI-GeneID:  94291103 NCBI-ProteinID:  XP_067757389 UniProt:  A0A836IT91 LinkDB All DBs Position 21:238593..245339 Genome browser AA seq 2248 aa AA seqDB search MLYDRVNDICSSQGEAIRYLLTAVSKNTVQTTFTTLEQFCSRSVELHRYTIKAACTTLVA VRSDERALLASWLVNEALGRPNGLTLVACALDGSSSTLTKESLTALMANDLKLTPMKQMQ MAMALVLGGNAMVKSAATDLLEEFNVPQAALKEDDGGVRAAALLSRQVGLAPTNLDSQLT NVCHTVALPKPKTEVKPRVSVAGVLRELGTGCVTTLADSRELLSIFPHSFTERDGAEVLA FFASAGSAVNDSNTYASLMMASGKHSPKSMSGTTTLVNAMPLLDALCEGSPKGFNWDLVI RLLDQPDGEPFRVKHISVIFDAYHRFQPDNEYPSVGLFLGRWTNTMRQRSVLEYILRHPD KVNRKPLALDAPSELLPATKPPGVTAPEMDLWRSTTFMEAAVHVASRDKDFDNDVFRPTS EKLPLLFLFGLFTGNFQGTVKHFTAMKHLLKSHCPSLDLVSQHIVPEVERRGRLSTVIGV LSDLTEAAPERLVDVLQVVFKCKSAAKRVLAESGSPRLVTAVAMCMEEAGEPSDKWLQRA LEGKLHFRASSTENRFAVAMNIVEVAEMLQEKQLYVVSATAALNALLASPLKEVLRSVAD CAKTLLASTDSLFPDDVENEALEFFKRMYAAGTTAAAIATLEGLLKSTVQRDAQLYACIV GIMFDETSAISCYPRKELQLFAELYGQMIAKDLLPPNQQQRAWGILLPAVAKPANYAVEE YGIIALEQVKPRLPDWPQYGRALRYVRDLDFRVPGIMAAINRGIKQEDTAARGGGATSAD SGDGNPTSPTSPKQPGSPNKAVAAIDPAIVSAASAQLKKFTDATATKLHTLDIGTLVTNS NVTAPPRVIQEQLNFLIGNTDVRNLESNATELSQLLRPEYYEYFADYLVVKRAALEPNYH SMYIDLIAKLHSKNMERALRKASIGAVHRLLNSQKISTDSSERILLRNLGSWLGSITLEK NIPILQQDLHFKALLCQGIREGKLVPVVSFITRVLTSCAKSRFFCPPNPWTMAQLGLLME MYTLPHLRVTLRFELELLLKSLDQSMQDLAQYMRLHASHASTETRLRDVYDEIDINESPD FRVGEDEGNLPAAAIAAQPAPAASTSPAPASLRSSARPLQASAEPFQPKEKSQALPPEVS RVMQMLDKPIRPPIGISLNWVFATLNDPAFGTNAQRLTEHRMEIVGQLQAVVDEAVSYCM QRSVAIAARTTERLVLKDYARDPLPDDMLVAGDAMARSLASSLSYVMVREELPLLLHRYM TNVLERILGPYTPLDHKTTIRDTLVVRNLELCMRAVEYSVGEEAATATSRFLIEVAREKA SAFADQEPLPLPPDQIEAAELLHVMGETLVPSGRMPAPQREVYDDFYSCVPPVAVFNIAL RSVEEAVSRYHANENAAPLDFAQLDAAGPKAGGLADDAQNSVRQHLSRLMSLITEESSTY FLSPMLNKLMSLAMSTERLTKLVNNSARNAQAAAAAAAAAAAAAANSNHDVTPNTVEDPV WQQEALRVSTALHQLYLRILLRCRECGEETNRSEFTRLFLRHSNCYSFSKMTADLIRIKM IKSNEFDDALAKALTNGTSNYVTFAGDIITDVIIKEKVVASKDMRRTLVALDTIARARAP RAASAATAQTFPSYVTEPPLCKVVPEHVMKLLVPCDCVRPGEDEAFQKEVGQLMNDWITV WPQKSHRYAEKRIPSVEFVRTLQQRRMLDTAHLQTFLSLGVRYCVEYYANTMLAMERADG NITSETLVGTRPGGPPGYRTPYTAKPFVMCDSFVELVMVLLQCCSLRNEASHDLRAETTL LRRVLDAVTRVLTEHHNFVAKVRPAPSWILAADEQFIPLFPQQPYVRLLSNLVHSLHRLE ISTTRTMSTEFTTAFHTFLRRVHPMEYPGFVFGWLEILSHRHVIPRFMNVESMWPHYVEL LGGAMMFVKFLIKGNRISPNGLVYYKSLLKLVLVLLHDYPRFLIAQHYPLCEAIPLSCVQ LLNTVLCSFPPDRRLPEPFPHVDSSDPAMLQVLDTSVQESCIKTAFTTFNVKSQLLADLE MMVTRDDAPLRESVLADLLNDLTQPTANRSFINAVVQHIAIVYLRTHDNRIPANFSKSNA VACYRFLCSRFNSKRRYYMLGACANQLRFPNIQTNFFANVVLNLFLPSPGVDAHTQTCVQ EQITRVLAEKTVIVQPHPWGVLNTFVELMREPKYKFWETSFIHYAPLDSMFTKLHHTVHT RLSKTDGARADPGTGATAAAAIGATPTA NT seq 6747 nt NT seq  +upstreamnt  +downstreamnt atgttgtatgatcgggtgaacgacatttgcagctcgcaaggggaggcgattcgctacctc ctgactgctgtctccaagaacaccgtgcagaccacgttcacgacgttggagcagttttgc tcccgctccgttgaacttcatcggtacaccattaaggcagcgtgcacaaccttggtggcg gtgcgcagcgatgaacgggcactgctggcgtcttggttggtgaacgaggcgcttgggcgg ccgaatggcttgactcttgttgcctgcgcccttgacggcagttcttcgactttgacgaaa gagtctctcactgctttgatggcgaacgacctcaaactgaccccgatgaagcagatgcag atggccatggcgctcgtgctggggggaaatgccatggtcaagtcagcagctacagacctt ctagaggaattcaacgttccacaggcggcgctcaaggaggacgatggcggtgtgcgcgcc gcggcactcctgtcgcgacaggtaggcctagcccccacgaacctcgacagccagctgaca aatgtgtgccacaccgtcgcgctgccgaagcccaagacggaggtgaagccacgcgtgagc gtggcgggtgtcttgcgcgaactgggaacgggctgtgttacgacgttggcggactcgcgc gagctgctcagcattttcccgcactccttcacagagcgcgacggggctgaggtgctcgcc ttcttcgcttcagcgggctcggccgtcaatgacagcaacacgtatgcgtcactcatgatg gcctcaggaaagcattcgccaaagagcatgagcggcacaacgacgcttgtgaacgcaatg ccgctcttggatgcgttgtgtgaggggagcccgaagggcttcaactgggatctcgtcatc cgcctgcttgaccagccggacggcgagccgttccgcgtgaagcacatctcggtcatcttc gacgcctaccaccgctttcagcccgacaacgagtatccgtctgtggggttgtttctgggt aggtggacgaacacgatgcgccagcgcagtgtactggagtatattctgcgccaccccgac aaggtgaatcgcaagccactcgcactagacgcaccgtcagagttgttgccagcgacgaag ccacccggtgtgacggcccccgagatggacctctggcgctctacgacgtttatggaggcc gctgtgcacgtggcgagtcgtgacaaggactttgacaacgacgtttttcgtcccacctcg gagaagctgccgctgcttttcctgttcggtcttttcacgggcaactttcagggtacggtg aaacacttcacggccatgaagcacctgctcaagtcccattgcccatccttggacctcgtg tcgcagcacattgtgcccgaggtggagagacggggccgtctcagcaccgtgataggggtg ctctcggacctgacagaggcggcgccagagcgtcttgttgatgtgttgcaggtagtgttc aaatgcaagtctgcggcgaagcgcgtgctcgccgagagtgggagccctcgcctcgtcacg gccgttgccatgtgcatggaggaggcaggtgaaccgagtgacaagtggctgcagcgcgcg ctagagggcaagcttcacttccgtgctagctccacagagaaccgattcgcggtggccatg aacatcgtcgaggtagctgagatgctccaggaaaagcagctgtacgtggtgagtgcgacg gcggctctcaatgctctcctcgcctccccgctcaaggaggtgctgaggagtgtggcggac tgcgccaagacactgctcgcctcgaccgactctctttttccagacgacgtcgagaacgaa gcgctggagttcttcaagaggatgtacgccgctggcactaccgccgctgccatcgcaact ctcgagggcttgctgaagagcacagtgcagcgtgacgcgcagctgtacgcctgcattgtg ggcatcatgtttgacgagacgtcagccatcagctgctacccgcgcaaggagctgcaactg tttgctgaactgtacggccagatgattgccaaggatctgctgccaccaaatcagcagcag cgggcgtggggcattctgctgccagccgtcgcgaagcctgccaactacgcggtggaagag tacggtattatcgcgctcgagcaggtgaagccacggctaccggactggccgcagtacggt cgcgcgctgcgctacgtacgagacttggacttccgcgttcccggtatcatggctgcgatt aatcgcgggatcaaacaggaggacaccgcagcgcgtggtggcggagcgacatcggcggat tccggcgacggaaacccaacctccccaacgtcgccgaagcagcctggctctccgaacaag gcagtcgctgccatagatccagccatcgtttcggcggcgtcggcgcagttgaagaagttc acggacgcgacagcaacgaagttgcacacgctggatatcggcacgctcgtgacgaactcg aacgtgacagccccgccgcgcgtgattcaagagcaacttaattttttgattggcaacacc gacgtgcgcaacctggagagcaacgcgacggagctgtcacaactgctgcggccggagtac tatgagtactttgcagactacctggtggtgaagcgtgcggcgctggagcccaactaccac tccatgtacattgatctgattgcgaagctgcactcgaagaatatggagcgtgcgctgcgc aaggctagtatcggtgcagtgcatcgcctgctgaactctcagaagatcagcaccgactcg agtgagcgtattctgctgcgcaacctcggctcctggctcggcagcatcacactggagaag aacatccctatcctccagcaggacctgcactttaaggcgctcctttgccagggcattcgt gagggcaagctggttccggtcgtctccttcattacacgcgttctgaccagctgcgccaag tcacgcttcttctgcccaccaaacccgtggacgatggcgcagctggggttgctgatggag atgtacacactgcctcacctgcgcgtaacgcttcgcttcgaactggagctgctgctgaag tctctggatcagtcgatgcaggacttggcgcagtacatgcggttgcacgcctcccacgca tccaccgagacacgactgcgcgacgtgtacgacgaaatcgacatcaacgaaagtcccgac ttcagagtcggggaggacgagggcaacttgcctgcggcggctatcgcggcgcaaccggcc ccggcagccagcacgtcgcctgcaccagcgtcgctgcgcagcagcgcccgcccattgcag gccagcgccgagccgttccagcccaaggaaaagtcgcaggcgctgccacccgaagtgagc cgtgtgatgcagatgctcgacaagccgatccgccccccgatcggtatttcgttgaactgg gtgtttgccacgctgaacgatcccgccttcggcaccaacgcccagcgtctcactgagcac cggatggaaattgttgggcagctgcaggctgtggttgacgaggccgtaagctactgcatg cagcgcagtgtcgccattgctgctcgcacgacggagcggctggtgctgaaggactacgcg cgcgacccgttaccggatgacatgctcgtcgctggcgatgcgatggctcgctcattggct tccagcttgagctacgtgatggtgcgtgaggagctaccgctgctcctgcaccgttacatg acaaatgtcctagagcgcattctgggcccctacacaccactcgaccacaagacaacgatc cgcgacaccctcgtggtgcgtaacctggagctgtgcatgcgtgccgtggagtacagcgtc ggcgaggaggcggctacggccacaagccgatttctgattgaagtcgcacgcgagaaggct agcgcctttgcggatcaggagccgctgccgctaccgccagatcaaattgaggccgcagag ctgctgcacgtcatgggtgagacgctcgtgccgtctggccggatgccggccccgcagcgg gaggtgtatgatgacttctacagctgcgtgccgccggtggctgtatttaacatagctctg cgcagcgtcgaggaggcggtgtcgcggtatcatgccaacgagaatgcggcgcctctggac tttgcgcagctcgacgccgctggcccgaaggcaggcgggctggctgacgacgcgcagaac tccgtccgacagcacctcagccgtctcatgagcctcatcacggaggagtcgagcacttac ttcctcagccctatgttgaacaagctcatgtccctcgccatgtcgacggagcggctaacc aagctggtgaacaatagcgccaggaacgcacaggctgctgctgctgctgctgctgccgcc gccgccgccgccgccaacagcaaccatgatgtcacaccgaacacagtggaggacccagta tggcagcaggaggcgctgcgggtttccacagcactgcatcagttgtacctccgtattctg ctccggtgccgcgagtgcggcgaggagacgaaccgcagcgagttcacgcgactgtttctc cgccacagcaactgctattccttctcgaaaatgaccgctgacctcatccgcatcaagatg atcaagtctaacgagtttgacgatgcgctggcgaaggcactgaccaacggcacctccaac tacgtcacgtttgcaggcgatataatcactgacgtaatcattaaggagaaggtcgttgcg tcgaaagacatgcgccgcacgctcgtggctctcgacaccattgcgcgggctcgggctccg cgcgctgcatcggcggcgaccgcgcagacgtttccgtcatacgtcacggagccgcctctg tgcaaggtagtgccagaacatgtaatgaaactcctcgtcccatgcgactgtgtccggcct ggcgaggacgaggccttccagaaagaggtgggtcagcttatgaatgattggatcacggtg tggcctcagaagagccaccgctatgccgagaagcgcatcccgtctgtcgagttcgtgagg acgctgcagcagcgccgcatgctggacacggcccaccttcagaccttcctaagcctgggt gttcgctattgtgtggagtactacgccaacacgatgcttgcgatggagcgagcagacgga aacatcacgagcgaaacgttggtgggcacgcggcccgggggccctccaggctaccgcaca ccgtacaccgcaaagcctttcgtcatgtgcgacagttttgttgagctggttatggtattg ttgcagtgctgctctttgcgcaacgaggcttcgcacgacttgcgggccgagacgacactg ctgcgccgcgtgctcgatgccgtgacacgcgtgctgacagagcaccacaacttcgtcgcc aaggtccgccctgcaccgtcatggattctcgctgccgatgagcagttcatcccgctcttc ccacagcagccgtacgtgcgcttgctgagcaacctcgttcactcacttcaccggctagag atatcgacgacgcgcactatgtcaacagagttcacgacggccttccatacatttctgcgc cgcgtgcaccccatggagtaccccggctttgtgtttggctggctagagattctgtcgcac cggcacgtcatcccgcgcttcatgaacgtggagtcgatgtggccccactatgtcgagctc cttggtggtgccatgatgtttgtgaagtttctgatcaaagggaatcgcatctcaccgaac ggcctggtctactacaagtccctgctgaagcttgtgctggtgctcttgcatgactacccg cgattcttgatcgcccagcactacccactctgcgaggcgattccactctcctgtgtgcag ctgctcaacacggtgctgtgttccttcccacctgacaggcgcctgccagagccgttccct catgttgactccagtgatccggcgatgctgcaggtgctcgacacatctgtgcaggagtcg tgcattaagacagccttcacaaccttcaacgtgaagtcgcagcttctggcggatctcgag atgatggtcacgcgcgacgatgccccgctgcgcgagagcgttcttgcggaccttctgaac gacttgacacagcctactgcgaatcgcagcttcatcaacgcggtggtgcagcacatcgcc atcgtgtacttgcgcacccacgacaaccgcatccccgcaaatttctcgaaatccaacgct gtcgcgtgctaccgcttcttgtgcagccgcttcaactcgaagcggcggtactacatgctc ggcgcctgcgccaaccagctgcgcttcccgaatatacaaacaaacttttttgcaaatgtg gtgctgaacctgttcttgccatcaccgggcgtggacgcgcacacgcagacctgtgtgcag gagcagatcacacgcgtcctggccgaaaaaacggtgattgtgcagccgcatccatggggg gtgctcaacacctttgtggagctgatgcgcgagcccaagtacaaattctgggaaacgtca ttcatccactatgctccgctcgactccatgttcacaaagctgcatcacacggtacacacg cggttgagcaagaccgacggcgcccgtgctgatccaggcacgggtgccaccgccgccgcc gccatcggcgcgacgccgacagcttag

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