KEGG   Pseudonocardia sp. HH130630-07: AFB00_05530
Entry
AFB00_05530       CDS       T04486                                 
Name
(GenBank) type I-E CRISPR-associated protein Cas5/CasD
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
phh  Pseudonocardia sp. HH130630-07
Brite
KEGG Orthology (KO) [BR:phh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:phh02048]
    AFB00_05530
Prokaryotic defense system [BR:phh02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    AFB00_05530
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: ANY05851
UniProt: A0A1B1ZJD2
LinkDB
Position
complement(1165446..1166144)
AA seq 232 aa
MTVLLLRLAGPLQSWGTGSRFTRRATDRVPSKSGVVGLLAAAQGRRRTDPLEELLSLRMG
VRIEQAGRVERDFQTAARPGERTPVSVSTRHYLADAVFLAAVEGDPILLDALHDALRRPH
FPLFLGRRSCPPAGPIVQGMRDGTAVTALQAEPWRAAPWFQKAHPDPSVRLDLVADCDPT
DPAAELVRNEPVEQGFDPRHRQWEWRPVKRHDPVTVTNPLVTQRTHDPMGVL
NT seq 699 nt   +upstreamnt  +downstreamnt
gtgaccgtcctgctgctgaggctggccgggccgctgcagtcgtggggtaccggcagtcgc
ttcacccggcgcgcgaccgaccgggtcccgtccaagagcggcgtcgtcggtctgctcgcc
gcggcccagggccgccgacgcacggatcccctggaggaactgctgtcgctgcgcatgggc
gtgcgtatcgagcaggccgggcgcgtcgaacgtgacttccagaccgccgcccggcccggt
gagcgcacaccggtgtcggtgagcacgcggcactacctggccgacgcggtgttcctcgcc
gccgtcgagggcgaccccatcctcctcgacgcgctgcacgacgcgctgcgccggccacac
ttcccgctgttcctcggccgtcgttcctgcccgccggccggtccgatcgtccagggcatg
cgcgacggcaccgcggtcaccgcgttgcaggccgaaccctggcgtgcggcgccgtggttc
cagaaagcccacccggacccgagcgtgcggctcgacctcgttgccgactgcgacccgacc
gaccctgccgccgaactcgtccgcaacgaacccgtcgaacagggcttcgacccgcggcac
cgccagtgggagtggcgcccggtcaagcgccacgaccccgtcacggtcaccaatccgctg
gtcacccaacgaacccacgacccgatgggggtgctctga

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