Pseudonocardia sp. HH130630-07: AFB00_18280
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Entry
AFB00_18280 CDS
T04486
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
phh
Pseudonocardia sp. HH130630-07
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phh03021
]
AFB00_18280
Transcription machinery [BR:
phh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AFB00_18280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_3
HTH_24
KORA
HTH_Crp_2
HTH_AraC
MarR
HTH_28
Rad51
DUF3577
Motif
Other DBs
NCBI-ProteinID:
ANY07923
UniProt:
A0A1B1ZQ75
LinkDB
All DBs
Position
complement(3837261..3838037)
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AA seq
258 aa
AA seq
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MTADPEYAHLAPVLAEYAALDAGDPRREPLRDRLVTGYLPVAQHIARRFNHRGEPLDDLV
QVATVGLINAIDRFDPEKGGEFFSFAVPTISGEVRRHFRDQSWSMRVPRRLKDMHVSING
AVSELSQRLGRAPRPSEIAELLDLPVQEVLEGLEAAEAYRSSSLDEMLSSEDGSATVGSL
VGDADAALDRVDYRESLRPLLAELAPRERTIVMLRFFGNRTQTQIAEEVGISQMHVSRLL
AQTLNRLRDRLDSDDRAL
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcggatcccgagtacgcccacctcgccccggtcctcgccgagtacgccgccctc
gacgccggcgacccacggcgcgagccgctgcgggaccggctggtcaccggctacctgccg
gtcgcccagcacatcgcccgccggttcaaccaccgcggggaaccgctcgacgacctggtc
caggtcgcgaccgtcggcctgatcaacgccatcgaccggttcgatcccgagaagggcggc
gagttcttctccttcgccgtccccacgatctccggcgaggtccggcggcatttccgggac
cagagctggtcgatgcgggtcccccggcggctcaaggacatgcacgtctcgatcaacggc
gcggtctccgagctctcccagcggctcgggagggcaccgcgcccgtcggagatcgccgag
ctgctcgacctgcccgtgcaggaggtcctggaggggctggaggcggccgaggcctaccgc
agctcgtccctcgacgagatgctgtcctccgaggacggcagcgccaccgtgggatcactg
gtgggcgacgccgacgccgcactcgaccgggtcgactaccgcgagtcgctgcgcccgctg
ctcgccgagctcgccccgcgcgagcgcaccatcgtcatgctgcgcttcttcggcaaccgc
acgcagacccagatcgccgaggaggtcgggatctcgcagatgcacgtctcccggctgctg
gcgcagaccctgaaccggctccgggaccggctcgactcggacgaccgggcactgtag
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