Pseudopodoces humilis (Tibetan ground-tit): 102105865
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Entry
102105865 CDS
T02921
Symbol
SH3RF2
Name
(RefSeq) putative E3 ubiquitin-protein ligase SH3RF2
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phi01009
]
102105865 (SH3RF2)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phi04121
]
102105865 (SH3RF2)
Enzymes [BR:
phi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102105865 (SH3RF2)
Protein phosphatases and associated proteins [BR:
phi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102105865 (SH3RF2)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102105865 (SH3RF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_2
SH3_1
zf-C3HC4_2
SH3_9
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_4
zf-C3HC4_4
zf-rbx1
zf-RING_11
DUF1272
zf-RING_10
zinc-ribbons_6
Motif
Other DBs
NCBI-GeneID:
102105865
NCBI-ProteinID:
XP_005523855
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MDDLALLDLLECPVCFEKLDATAKVLPCQHTFCKPCLQRILKSQKELRCPECRTLVLGSI
EQLPSNLLLIRLLDGVRCGQNVTRFGSIQRSGVLSSPASIRRVPRGLQLHQHRLATNPRL
HMEGVPRARALYTYRGHNPGELRFNKGDTIVLLRQLDENWYLGELNGISGVFPASSVQVI
KHLPLPRPLYSLDLRGRATADSKDILTFQKPSSPAQQLLQASKSHWSPQSKGASLQTASP
KAKATDSAAFPKVPDSRRKSLRQFSITTALNTLNRMVHSPTDRPVLEISSPVLISSSNPS
VATQSSEKAEPPYGTPLQVSTSYYPSPGPLGPPAAIVTLPHLQQHGPAYLKSSLSDSKMP
SLYTSWTLSTSSLSSQGSVSEKGPRQSRALRPLLLPVPVPAPGRTAGAPAPLRRGRGSSR
KNGSLQRPGQAGTPVQISGSLRRPTAAGRPLHFQLYPHSIAPGAAVDEATRPNFYEASPA
LLVRGGESRTPSVCSSVILDAKDPPVKSEAAPKPPASAPPSILVKPETSRNSAEKQVKTV
RFQNHSPPPPKRHSLQPSPRLVRSRTEPGPEGLLPEPRLGPELLLLYSPRLGSSPLHPRR
ALHPKALSLDLSGQLTFPIKKSYSSISAN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggacgacttggctctccttgacctgttggagtgtcccgtgtgctttgaaaagctcgac
gccacagcaaaggtgctgccgtgtcagcacacgttctgcaagccgtgtctgcagaggatc
ctgaaatcccagaaggagctccggtgccccgagtgcaggaccctggtcctgggcagcatt
gagcagctgccctccaacctgctcctcattcgcctcctggatggagtcaggtgtgggcaa
aacgtcaccaggttcggctcgatccagaggtcaggggtcctgtcctcccccgcctccatc
aggagggtccccagggggctacagctgcatcagcaccggctggcaacgaaccccaggctc
cacatggaaggggtgccacgagccagggccctgtacacctaccgcgggcacaaccccggg
gagctgcgcttcaacaagggggacaccatcgtcctgctgcggcagctggatgagaactgg
tacctgggcgagctcaacggcatcagcggcgttttcccagccagctccgtgcaggtcatc
aagcacctgcccctgccccgcccgctctacagcctggacctgcggggccgggccacggcg
gacagcaaggacatcctgaccttccagaagcccagcagccctgctcagcagctcctgcag
gccagcaaaagccactggtccccccagtccaagggcgcgtccctgcaaacggcgtctccc
aaggccaaggccacggactcggcggctttccccaaggtgcctgactccagacggaaaagt
ctgcggcagttctccatcaccacggccctcaacaccctgaaccgcatggtgcactcgccc
accgaccgcccggtgctggagatcagctcccccgtgctcatcagctccagcaaccccagc
gtggccacccagagcagcgagaaagccgagcccccctacgggacccctctccaggtcagc
acctcttactacccctcaccaggaccactggggcccccggcagccatcgtcaccctgccc
cacctgcagcagcacgggccagcttacctgaaatctagtctctccgactcgaagatgcct
tccctgtacacctcatggacgctgtccacctcctcgctgtcctcgcaagggagcgtgtcc
gagaagggcccgaggcagagcagagccctgcggccgctgctgctgcccgtgcccgtccct
gcccccggcaggaccgcgggggcaccggccccgctgcggcgcggccgcggcagcagcagg
aagaacggatccctgcagaggccgggacaggcagggacccccgtgcagatcagcggctcc
ctccggcgtcccacggctgcgggccggcctctgcacttccagctttacccgcacagcatc
gctcccggagctgccgtggacgaggcaacgaggccaaacttctacgaggcttcaccggcg
ctgctggtcaggggaggggagagccgaaccccctccgtgtgcagctcggtgatcctggat
gccaaagaccccccggtgaagagcgaggcggctccaaagccgcccgcctcagccccgccg
tccatcctggtgaaaccagaaacctcccgcaacagcgccgaaaagcaagtgaagacggtg
aggttccagaaccacagcccgccgccgcccaagcggcacagcctgcagccgtcgccgagg
ctggtccgcagcaggacagagcccgggcccgaggggctcctgcccgagccccgcctgggc
cccgagctgctgctgctgtactcgccgcgcctgggctccagccccctgcacccgcgccgg
gcgctgcaccccaaggcgctgtccctggacctctcggggcagctgaccttccccatcaag
aagagctacagcagcatctctgcaaactga
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