Pseudopodoces humilis (Tibetan ground-tit): 102108087
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Entry
102108087 CDS
T02921
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04510
Focal adhesion
phi04512
ECM-receptor interaction
phi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102108087 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102108087 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102108087 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
phi00535
]
102108087 (COL9A3)
Proteoglycans [BR:
phi00535
]
Extracellular matrix (ECM) proteoglycans
Others
102108087 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102108087
NCBI-ProteinID:
XP_005525005
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search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NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctggattctctgctcttgggctcctctccctgtgtcagctcttggccacagcatca
gctcagtcccttccgagaattggaccacaaggccctcctggaccacgaggaccccctgga
ccatctggcaaggacggcattgatggagagccaggccctcctggtttgccaggcccacca
gggccaaaaggtgcaccagggaagcctggagctgcaggtgaagctggattgcctggcctt
cctggagtggatggtttaacaggaactgatggcccccctggcccaaatgggcctccagga
gaccgtggtgcattaggacctgctgggccacctggaccagctggcaaaggactaccagga
cctccagggcctccaggacccagtgggctcccaggtggacatggatttcggggcccttct
ggaccttttggtctgccaggattcccagggcctcctggaccacctgggcctcctggtctt
ccaggtgcccttcctgatggcggtggggaccttcagtgcccagctctgtgcccaccaggt
cccccaggccccccaggaatgccaggcttcaagggacacactggtcacaaaggggagcct
ggtgaagtaggaaaacaaggagagaagggtaaccctggccctcccggccctcccggaatt
cccggcggtgtcggcctgcagggcccaagaggactaagaggcctccctggtccaatgggt
ccagccggcgacagaggtgacattggattcagaggcccacctggaatcccaggacctcca
gggaaagctggggaccaagggagcaaaggacctcagggattccgggggcccaaaggtgac
actggtaaacctggaccaaaaggaaacccaggggctcgtggactcataggagaacctgga
atgcctggcaaggatgggcgggatggagctcctggactcgatggtgagaagggcgacgca
actcccatgggtgctcctggagagaaggggccaaatggacttcctggtctgcctggaaga
gcaggtattaaaggctcaaagggtgaaccaggcagccctggagagatgggagaggcaggt
ccctcaggagagccaggcatccctggtgatgttggcattcctggtgagagaggcctgccc
ggacccagaggagcaactggaccacttggcctccaaggccccacaggagcccgaggtgtc
cgaggtttccaggggcccaaaggtgccagtggtgagcctggccttcctggcccgactggg
atccgtggagagacaggtgacaggggtcctgttggtgttcctggtccgaaggggaaccag
ggcattgctggagcagatggcctgccaggtgacaaaggagagctgggtccctttggaccc
cctggccaaaaaggagagccaggaaaaagaggagaacttggtccaaaaggtgtccaagga
cctaatgggacagctggagcaccagggatcccaggacatccaggacccatgggtcaccag
ggagagaggggtgtccctggcatcacaggaaaacctggacctcctggaaaagaggccagt
gaacaacatatcagagaactctgtggggaaatgataaatgagcaaattgcacagttggct
gctaacctgaggaagcccttggctcctggaatgacgggacggcctggcccagccgggccc
ccaggtcctcctggaaccacaggaagtgttgggcatcctggtcctcgggggcctcctgga
tacagagggccaacaggagagcttggtgatcctgggcccagaggtgacaccggtgaaaag
ggagataaaggacctgttggccaaggcatcgatgggcctgatggtgaccaagggctgcag
ggaccacctggtgtgcctggaattaccaaaaacggccgtgatggtgctcagggtgaacct
gggctgccaggggatcctgggactcctgggactattggggctcagggaactccaggaata
tgtgacacgtcggcttgcatgggagctgttgctgcatcaacttccaaaaaatcataa
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