Pseudopodoces humilis (Tibetan ground-tit): 102111047
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Entry
102111047 CDS
T02921
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04510
Focal adhesion
phi04512
ECM-receptor interaction
phi04518
Integrin signaling
phi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102111047 (COL6A2)
04518 Integrin signaling
102111047 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102111047 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102111047 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phi04147
]
102111047 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
phi00536
]
102111047 (COL6A2)
Exosome [BR:
phi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102111047 (COL6A2)
Glycosaminoglycan binding proteins [BR:
phi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102111047 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
102111047 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
102111047
NCBI-ProteinID:
XP_005532746
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MFQQALFPTLLCVALVPLHAAQLDVDVGDVSPTSCAEKRNCPINVYFIIDTSESVALQTV
PIQSLVDQIKRFIPMFIDKLESELYQNRVYITWQFGGLHYSDVVEIYSPLTSSKDIYLPR
LSAIKYLGRGTFTDCAISNMTQQIQTQMANGVNFAVVITDGHVTGSPCGGMKMQAERARD
MGIKLFAVAPSEKVYEQGLREIANLPHELYRNNYAITQRDTLEIDINTIDRIIQAMKHEA
YGECYKMSCLEIAGPPGPKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGV
PGLKGEKGEIGSDGRRGAPGLAGRNGTDGQKGRLGRIGPPGCKGDPGDKGPDGYPGDAGD
QGERGDTGIKGDPGRPGRSGPLGPPGEKGSPGLPGNPGAQGPAGTKGRKGEVGPPGPKGE
AGRRGDPGTKGSRGSPGGIGERGDPGPEGIRGLPGEVGNKGARGEQGLPGPRGPSGAVGE
PGRIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGGRGEL
GPKGVQGTKGEKGEPGDPGPGGEPGQRGPPGEAGPEGTPGPPGDPGLTDCDVMTYVRETC
GCCDCEKRCGALDIMFVIDSSESIGYTNFTLEKNFVVNVVSRLGSIAKDPKSQTGARVGV
VQYSHEGTFEAIKLDDERINSLSSFKEAVKRLEWIAGGTWTPSALQFAYNKLIKESRRKK
AQVFAVVITDGRYDPRDDDKNLGALCGRDVVVNTIGIGDMFDQPEQSETLVSIACNEPQR
VQKMRLFSDLVAEEFIDKMEDVLCPDPQVVCPELPCQTELAVAQCTQRPVDVVFLLDGSE
RIGEQNFQSAHRFVEDVAQQLTLARSNSDHMNARIALLQYGSERDQNVVFPLTHNLTEIS
DALAQIKYLDSSSNIGSAIIHAINNIVLSPGNGQRLARRNAELSFVFITDGITGSKNLEE
AINSMKKQDVMPTVVALGSDVDMDVLLKLGLGDRAAIFREKDYDSLSQPTFFDRFIRWIC
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgttccaacaagccttgtttcccactcttctttgtgtggctctagttcctctccatgct
gctcagcttgatgtggatgttggagatgtcagtcctacctcttgtgcagaaaagaggaac
tgccccattaatgtctacttcatcattgacacctcggagagcgtggctctgcagactgtg
cccatccagagccttgtggaccaaataaagcgattcatccccatgttcattgataaattg
gagagcgagctctaccagaaccgagtctacatcacctggcagtttggtgggctccattac
tcagacgtggtagaaatttacagccctttgacaagcagcaaagacatttacctgcccagg
ctgtctgccatcaagtacctgggccggggcaccttcacggactgtgcgatttccaacatg
acccagcagatccagacccagatggctaacggcgtgaacttcgcagtggtcatcactgat
ggccacgtgacaggcagcccctgcggggggatgaagatgcaggctgagagggcacgagac
atgggcatcaagctgtttgcggtggcccccagcgagaaggtgtatgagcagggcctgcgg
gagatcgccaacctgccacatgagctctaccgcaacaactacgcgatcacccagagagac
accctggagatcgacatcaacaccattgacaggatcattcaggctatgaaacacgaagcc
tacggggagtgctacaagatgagctgcctggagattgcaggtccacctggtcccaaggga
taccgagggcagaagggtgcaaaggggaacatgggtgagccaggttcccctgggctgaag
ggacgacagggtgacccaggtattgaaggtccaatcggataccctggtcccaagggtgtc
ccggggctaaaaggagagaagggagaaattggatctgatggacggaggggtgcccctggc
ttggcaggaaggaacggcacagacggacagaagggccggctggggagaattggaccacca
ggatgcaagggtgaccctggtgacaagggccctgatggctacccaggagatgcaggagac
caaggagaaaggggagatacaggcataaagggggatcctggacggcctggtcgcagtgga
cccctggggcccccaggggaaaaaggaagcccgggacttccaggcaaccctggagctcaa
gggcctgctggaaccaaggggaggaaaggtgaagtgggacctcctggacccaaaggagag
gctgggcgacgtggagatccagggacaaaaggcagcagaggctctcctggaggcatagga
gaaaggggagatcctggtccagagggtattcgtggtctgcccggtgaggttggaaacaaa
ggagctaggggagaacaaggactgccaggacctcgaggcccttctggtgctgtgggagag
ccaggcaggataggatcacgtggggaccctggtgacttgggcccaagaggtgatgctgga
ccaccaggaccaaagggtgacagaggcaggcctggttttagctaccctggacccagagga
cctcagggtgacaagggtgagaaggggcagccaggacccaagggaggacggggtgaactt
ggaccaaaaggagtacaagggaccaaaggagagaagggggagccgggtgatcctgggcca
ggaggagagcctggacagcgtggtccacctggtgaagcaggcccagagggaacccctggc
ccaccaggagaccccggtctgactgactgtgacgtgatgacctacgtgcgagagacgtgc
ggatgctgtgactgtgagaaacgctgcggtgccctggacatcatgtttgtcatagatagc
tccgagagtatcggatacaccaacttcaccctggagaagaattttgttgtcaacgtggtc
agcaggctgggctctattgccaaggaccccaaatcacagacaggtgcccgtgttggggtg
gtgcagtacagtcatgaggggacttttgaagccatcaagcttgatgatgagcgcatcaat
tccctgtcaagcttcaaggaagcagtgaagcgcctggagtggatcgctggaggcacctgg
acgccatctgcccttcagtttgcctacaacaagctcatcaaggaaagcaggagaaagaaa
gcccaagtgttcgctgtggtgatcacagacgggcgctacgacccccgggatgatgataag
aaccttggggctctttgtggtagagatgtagtggtcaacaccatcggcattggagacatg
ttcgaccagccagagcagagcgagaccctggtctccattgcctgcaacgaaccccagcga
gtccagaagatgaggctcttctcagacctggtggcagaggagttcattgacaagatggag
gacgtgctctgcccagatccacaggtcgtctgccctgagctgccctgtcagacagagctt
gccgtagcccagtgcacccagcgccctgttgacgtcgtcttcttgctggacggttcggaa
aggattggggagcagaacttccagagcgctcaccgcttcgtggaggacgtggcccagcag
ctgacactggcccggagcaacagtgaccacatgaatgctcggattgcactgctgcagtat
ggcagtgagcgggaccagaacgtggtcttcccactgacccacaaccttactgagatctcc
gatgccctggcacagatcaagtacctggactcatcctccaacatcgggtcagccatcatc
cacgccatcaacaacatcgtgctcagcccaggcaacgggcagcgacttgcccggcgcaat
gcagagctctcctttgtcttcatcaccgatggcatcacaggaagcaaaaacctggaggag
gccatcaactccatgaagaagcaagatgtcatgcccacggttgtggctctggggagcgac
gtggacatggatgttctgctgaagcttggcctgggggaccgggcagctatcttccgggag
aaagactatgacagcctctcccagcccaccttctttgacaggttcattcgatggatttgt
tag
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