Pelagibacterium halotolerans: KKY_3856
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Entry
KKY_3856 CDS
T01645
Name
(GenBank) dipeptide transport ATP-binding protein DppD
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
phl
Pelagibacterium halotolerans
Pathway
phl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KKY_3856
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phl02000
]
KKY_3856
Transporters [BR:
phl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
KKY_3856
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_29
nSTAND3
AAA_23
MIT_C
AAA
AAA_15
TrwB_AAD_bind
AAA_18
AAA_5
PRK
AAA_33
DUF87
Sigma54_activat
NACHT
MobB
Motif
Other DBs
NCBI-ProteinID:
AEQ53838
UniProt:
G4RD88
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All DBs
Position
3847015..3848520
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AA seq
501 aa
AA seq
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MSASAVMGLIDCPPGRITSGQAIFQGADLLKLSPTDRRQINGRKIAMIFQDPLAHLNPVY
PVGWQIAEAMRIHGTDARKARQRTIELLDRVGLPNPAQRFDDFPHQFSGGQRQRIMIAMA
VALKPDVLIADEPTTALDVTVQAQILDLLKELQQETGMGLLLITHDLGVVAQIADRLVVM
KDGQVVESGDVLDVFQSPKHDYTRMLLEAVPGKAAFREPKKNDEVLIEVRNLVKEYRLSS
NPFSSNGSGVLRALDDVSFDLKRSETLGIVGESGSGKTTVARALLRLTQPTSGSIAYRGK
DIFGFNRSEMFDFRRKLQVVFQDPTASLNPRMSVFDIISEPWIIHKDVVPRRDWADAVAD
LLEQVGLHPDHATRYPHQFSGGQRQRIAIARALALKPEIILCDEAVSALDVSVQAQVIAL
LKDLQERHGLAYIFIAHDLPLVRDFADRVLVMSKGKVVEQGTTRSIFDAPAHPYTMDLIK
ASPEPDPSLYRNTIVLESAEL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcctcggccgtcatgggattaatcgactgccctcccggccgcattacgtccggc
caggcgattttccaaggtgctgatcttctgaaactatcgccaaccgaccggcgccagatc
aacggccggaagattgcgatgatatttcaggacccgctggcccatctcaatcccgtctac
ccggtcggctggcaaattgccgaggcgatgcgtatccacggaacggatgcgcgaaaggcc
cgacaacggaccatcgagcttctggaccgggtgggtttgcctaatcccgcacaacgattt
gatgattttccccatcaattctcaggcggccagcgccaacgcatcatgattgccatggcc
gttgccttgaaacccgatgttttgatcgcagacgagccgacaacggctctcgatgtgacc
gtgcaggcccaaatactagacctgctcaaagagctccagcaggaaacagggatggggttg
ctgctgatcacccatgacctcggggtggtggcgcagatcgccgatcgattggttgtgatg
aaagacggtcaggtggtcgagagcggtgacgtgctcgatgtctttcaaagccccaagcat
gattatacccggatgttgttggaggcagttccgggcaaggcagccttcagagagccaaag
aagaacgatgaggtgctcattgaagtgcgcaacctcgtcaaggaatacaggctctcgtca
aacccgttctcgtccaacggcagtggagtgctcagagcacttgacgatgttagcttcgat
ctcaagagatcagaaacactgggaattgtgggcgaatccggctccggcaagaccaccgtg
gcgcgcgccctgctgcgcctgacgcagccaacgtctggctcgatagcctatagaggcaaa
gacatttttggcttcaaccgcagcgagatgtttgatttcaggcggaagctgcaggtggtc
tttcaggatcccacggcatctctcaatccacgcatgagtgtgtttgatatcatctcagag
ccttggatcattcacaaggacgtcgtgccgcgccgcgattgggctgacgccgtagcggac
ctgctcgaacaggtcggcctccatcccgatcacgcaacacggtatccgcaccagttttcc
ggcggccagcgtcaacgtatcgcaatagcccgcgctttggccctcaaacctgaaatcatc
ctttgcgatgaagccgtgtcagctttggacgtttcggtgcaggcccaggttattgccctt
ctcaaggatctgcaggaacgtcatggacttgcctacatatttattgcccacgacttaccc
cttgtgcgcgatttcgctgatcgtgtgctggtcatgagcaaaggcaaagtggttgaacag
ggtaccacccgcagcatcttcgatgcgccagcccatccctacacaatggatctcattaaa
gcgagcccggagcccgacccatccttgtaccgaaacaccattgtgctggagtcggctgaa
ctatga
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