Pelagibacterium halotolerans: KKY_60
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Entry
KKY_60 CDS
T01645
Name
(GenBank) N-succinyl-L,L-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
phl
Pelagibacterium halotolerans
Pathway
phl00300
Lysine biosynthesis
phl01100
Metabolic pathways
phl01120
Microbial metabolism in diverse environments
phl01230
Biosynthesis of amino acids
Module
phl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KKY_60
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phl01002
]
KKY_60
Enzymes [BR:
phl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
KKY_60
Peptidases and inhibitors [BR:
phl01002
]
Metallo peptidases
Family M20
KKY_60
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AEQ50108
UniProt:
G4RGD2
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All DBs
Position
complement(59368..60537)
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AA seq
389 aa
AA seq
DB search
MTHPAVPLLADLIRRPSITPIEDGVLDVLEAFLSPLGFACTRLKFEGDGSYPVDNLYATR
KGKEPGPHLLFAGHTDVVPPGDAAAWTHDPFSGAIVDDVMWGRGATDMKSGVAAFCGALA
QLAQTGGWEKGAVSLAITNDEEADAVNGTKKLMEWAEAQGEKYDFAIVGEPSSFEIFGDS
IKIGRRGSASGKITVIGKQGHAAYPQRANNPMPVIAEIVRALYVPLDNGTEHFQPTNLEV
TSIDTGNPASNVIPERTTLRFNVRFNDTWTGETLLAEIHRRLAEVDTRGCAIAFEQIGPI
SRCFISQPEGHVARLCDVMEAFNGVRPQLSTIGGTSDARFISLYCPVVECGLIGATMHQV
DERVPVADVERLAEFYALYVEKFLSGEPA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcccgccgtcccgctgctcgccgatctgatccgccggccttcgatcaccccg
atagaggacggcgtgctcgacgtgctcgaagcctttctttcaccgctcggctttgcctgc
acgcggctgaagttcgagggcgacggctcctacccggtcgacaacctctacgccacccgc
aagggcaaggaacccggcccgcacctcctgtttgccgggcacaccgacgtcgtccccccc
ggcgatgcggcggcctggacccacgatcccttttccggcgccatcgtcgatgacgtcatg
tggggccgcggcgccaccgatatgaaaagcggcgtcgccgccttttgcggcgccctggcg
cagttggcgcagaccggtgggtgggagaagggcgccgtctcgctcgccatcaccaacgat
gaagaggcagacgccgtcaacggcaccaaaaagctgatggaatgggccgaggcgcaaggc
gagaaatatgatttcgccattgtgggcgagccctcctcgttcgagatcttcggggattcg
atcaagatcggacggcgcggttcggcttcgggcaagattaccgtgatcggcaagcagggg
cacgcggcctatccgcagcgcgccaacaatccgatgccggtcatcgccgaaatcgtgcgg
gcgctctacgtgccgctcgataacggtaccgagcatttccagcccacaaatctcgaagtc
acctccatcgataccggcaatccggcttcaaacgtcatccccgagcgcaccacgctgcgc
ttcaacgtccggttcaacgacacatggacgggcgaaacgctgcttgccgaaatccaccgc
cgtctcgctgaagtcgatacgcgcggctgcgccatcgccttcgagcagatcggcccgatc
tcgcggtgctttatctcccagcccgagggccatgtggcccgtctgtgcgatgtgatggaa
gccttcaacggcgtccgcccgcaactctcgaccatcggcggcacctcggacgcacggttc
atctcgctttattgccctgtggtcgaatgcgggctgatcggggcgaccatgcatcaggtc
gatgaacgcgtgccggttgccgatgtcgagcggttggccgaattctacgcgctttacgtc
gaaaaattcctctccggagaacccgcttga
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