Paenalcaligenes hominis: PAEH1_07895
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Entry
PAEH1_07895 CDS
T04704
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
phn
Paenalcaligenes hominis
Pathway
phn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAEH1_07895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phn03021
]
PAEH1_07895
03400 DNA repair and recombination proteins [BR:
phn03400
]
PAEH1_07895
Enzymes [BR:
phn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAEH1_07895
Transcription machinery [BR:
phn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PAEH1_07895
DNA repair and recombination proteins [BR:
phn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PAEH1_07895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AQS51494
UniProt:
A0A1U9K0I1
LinkDB
All DBs
Position
complement(1583209..1584192)
Genome browser
AA seq
327 aa
AA seq
DB search
MSQAFLKPRSIEVEAITKNHAKVVMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQITG
VVHEYSTISGVREDVVDIMLNLKGVIFKLHGREEVNLTVNKTGAGEVFARDIELPHDVEI
VNPDHHLATLTEDGKLEMQIKVEQGRGYVPGNVRALSDDRQHTIGRIILDASFSPVRRVS
YAVENARVEQRTDLDKLVLDIETNGVLTPEEAVRQAARILMDQISVFAALENEEDTFETT
ERAAPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLAARGLTLGMKLENWPPLGLERP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagcttttctaaagccacgttccattgaagtcgaagccatcactaaaaaccac
gctaaggtcgttatggagcctttcgagcgcggttatggtcacacactagggaacgcattg
cgtcgcattcttttgtcctccatgacaggttatgcgcctaccgaagtacaaattacgggt
gtggtacacgagtactccactatttccggtgtgcgtgaagacgttgttgacatcatgctt
aacctaaaaggcgtaatttttaaactgcatggccgtgaagaagttaacctgacggtaaac
aaaaccggcgccggtgaagtgtttgctcgtgatatcgagttgcctcatgatgtggaaatc
gttaaccccgatcaccacttggccacactaaccgaagacggcaagctagaaatgcaaatc
aaagtcgaacaaggccgtggttatgtaccgggtaacgttcgtgctttgtctgatgatcgt
cagcacaccatcggtcgtatcattcttgatgcctctttcagtcctgtacgtcgcgttagc
tatgccgtagaaaacgcacgtgtagaacaacgcactgacttggataaattggttctagat
attgaaaccaatggcgttttgactcccgaagaagctgtgcgccaagccgcacgtattcta
atggatcaaatctccgtgtttgccgcgttggaaaacgaagaagacaccttcgagaccacc
gaacgcgctgcgccgcaaattgatcccgttctattgcgtccagtagacgatctagagcta
acagttcgctctgctaactgcttgaaagccgaaaatatttactacattggcgatctcatt
cagcgtacagaaaacgaattgcttaaaacacctaacttgggtcgtaaatccctcaatgaa
atcaaagaggtattggctgcacgcggcttgacgctaggtatgaagttagaaaactggccg
cctctcggtttagagcgtccataa
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