Paracoccus homiensis: ACLISE_02875
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Entry
ACLISE_02875 CDS
T11345
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
phoi Paracoccus homiensis
Pathway
phoi02024
Quorum sensing
phoi03060
Protein export
phoi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
phoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ACLISE_02875 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ACLISE_02875 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACLISE_02875 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phoi02044
]
ACLISE_02875 (ffh)
Enzymes [BR:
phoi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ACLISE_02875 (ffh)
Secretion system [BR:
phoi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ACLISE_02875 (ffh)
Eukaryotic Sec-SRP protein
ACLISE_02875 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_16
AAA_14
AAA_22
AAA_33
ResIII
Thymidylate_kin
AAA_5
AAA_19
AAA_31
ATPase_2
APS_kinase
AAA_18
nSTAND_NTPase5
DO-GTPase1
AAA_7
nSTAND3
AAA
NACHT
KTI12
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
XMR59370
LinkDB
All DBs
Position
complement(551684..553180)
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AA seq
498 aa
AA seq
DB search
MFENLSDRLGGVFDRLTKQGALSEDDVTAAMREVRVALLEADVSLPVARGFVKSVTAKAT
GSAVTKSVTPGQQVVKIVHDELIKVLQGEDAPEALRIDNPPAPILMVGLQGSGKTTTTAK
LAKRLKDREKKRVLMASLDTNRPAAMEQLAILGQQIGVDTLPIVPGESAVQIAKRAKQQA
SLGGYDVYMLDTAGRLHIDQVLMDEVQAVRDIATPRETLLVVDGLTGQDAVNVATEFDAK
VGVSGVVLTRMDGDGRGGAALSMRAVTGKPIRFVGLGEKMDALEGFDAQRIAGRILGMGD
IVALVEKAQEVLEVEQAERMMKRFQKGLFNMNDLKGQLEQMQKMGGMQSIMGMMPGMQKM
AKQAEAAGMDDGAIRRQIALINSMTKKERANPAILQASRKKRIAAGAGMEVQELNRLLKM
QKQMADTMKKLGKMGKGGMLKQAMRAMTGKGGGLPDMENMDPAKMAEATKMLQDPKGLGG
DLSKAGLPGGLSGMFGKK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagaacctatccgaccgtttgggcggcgtcttcgaccggctgaccaaacagggt
gccctatccgaggatgacgtcaccgccgccatgcgcgaggtgcgcgttgccttgcttgag
gccgacgtctcgctgccggtcgcgcgcggctttgtcaaatcggtcacggccaaggcgacc
ggttcggcggtcacgaaatcggtcacgccggggcagcaggtggtcaagatcgtccatgac
gaactgatcaaggtgctgcagggcgaagacgcccccgaggcgctgcgcatcgacaacccg
cccgcgccgatcctgatggtcggcctgcagggttcgggcaagacgacgaccaccgcaaaa
ctggccaagcgcctgaaggaccgcgagaaaaagcgcgtcctgatggccagccttgacacc
aaccgccccgccgcaatggaacagcttgcgatcctgggccagcagatcggcgtcgatacg
ctgccgatcgtgccgggcgaaagcgccgtgcagatcgccaaacgcgccaagcagcaggcc
agccttggcggctatgacgtctatatgctggacaccgccggccgcctgcatatcgatcag
gtgctgatggacgaggtgcaggccgtccgtgacatcgccaccccgcgtgaaacgctgctg
gtggtcgatggcctgaccggtcaggacgcggtgaatgtcgccaccgaattcgacgccaag
gtcggcgtttcgggcgtggtgctgacccggatggatggcgacggacgcggcggtgccgcc
ctgtcgatgcgcgccgtcaccggcaagccgatccgctttgtcggtctgggcgaaaagatg
gacgcgctggaaggcttcgacgctcagcgaatcgccggccgcatccttggcatgggcgat
atcgtcgcactggtcgaaaaggcgcaggaagtgctggaggtcgaacaggccgaacgcatg
atgaagcgcttccagaaaggcctgttcaacatgaacgacctgaaaggccagctggaacag
atgcagaagatgggcgggatgcagtccatcatgggcatgatgcccggcatgcagaaaatg
gccaagcaggccgaagccgcgggcatggatgacggtgcgatccgccgccagatcgcgctg
atcaattccatgaccaagaaggaacgcgccaatcccgcgatcctgcaggccagccgcaag
aaacgtatcgccgccggtgccgggatggaggttcaggaactgaaccgcctgctgaagatg
caaaagcagatggccgacacgatgaaaaagctgggcaaaatgggcaagggcggcatgctg
aaacaggccatgcgcgcgatgaccggcaagggcggcggactgcccgacatggaaaacatg
gacccggcgaaaatggccgaggcgaccaagatgctgcaggatcccaagggactgggcggc
gatctgtccaaggccgggctgcccggcggactttcgggcatgttcggcaagaaataa
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