Phreatobacter cathodiphilus: C6569_07600
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Entry
C6569_07600 CDS
T05356
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
phr
Phreatobacter cathodiphilus
Pathway
phr02024
Quorum sensing
phr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C6569_07600
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C6569_07600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phr03019
]
C6569_07600
03036 Chromosome and associated proteins [BR:
phr03036
]
C6569_07600
Messenger RNA biogenesis [BR:
phr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C6569_07600
Chromosome and associated proteins [BR:
phr03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
C6569_07600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
AcMNPV_AC11
Motif
Other DBs
NCBI-ProteinID:
AVO44937
UniProt:
A0A2S0NA97
LinkDB
All DBs
Position
complement(1556999..1557250)
Genome browser
AA seq
83 aa
AA seq
DB search
MAERAQNLQDTFLNHVRKHKIPLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKHA
ISTIMPGAPVQLFDPQDGDGDKG
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacgagctcagaacctccaggacactttcctcaaccacgtccgcaagcataag
attccgctgacgattttcctcgtcaacggcgtcaagctgcagggcgtcgtcacctggttc
gacaatttctgtgtgctcctgcgtcgcgacggccactcgcaattggtctacaagcacgcc
atatccacgatcatgcccggcgcgccggtccagctgttcgatccgcaggacggagacggc
gacaagggctga
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