Primulina huaijiensis: 140974483
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Entry
140974483 CDS
T11038
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
phua Primulina huaijiensis
Pathway
phua00040
Pentose and glucuronate interconversions
phua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140974483
Enzymes [BR:
phua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140974483
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
TAP35_44
Motif
Other DBs
NCBI-GeneID:
140974483
NCBI-ProteinID:
XP_073294059
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Position
3:complement(29200938..29203496)
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AA seq
410 aa
AA seq
DB search
MSNITAISSLSLFFYFFLFLISHPVFSTFSHVQDPDLVVQDVHQSINASRRNLGYLSCAS
GNPIDDCWRCDPNWENNRQRLADCAIGFGKNAGGGRDGRIYVVTDPGDDDPVNPRPGTLR
HAVIQNEPLWIIFKRDMVIRLNQELVMNSHKTIDGRGASVHISNGPCITIHYASNIIIHG
IHIHDCVIAGNGIIRDSPQHAGHWEVSDGDGIVIFAGKNIWIDHCSLSNCKDGLIDVIHG
STAVTISNNYFTHHDKVMLLGHSDAFGQDKNMQVTIAFNHFGEGLVQRMPRCRLGYFHVV
NNDYTHWEMYAIGGSASPTIYSHGNRFLAPNDRFRKEVTKHEDAPQSEWIHWNWISEGDL
MLNGAFFRQSGGGAWAARSKASSLSARPVSLVGSVTRTAGALTCRAGSRC
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatatcacggccatttcctcgttatcgttattcttctacttcttcctattcttg
atatctcatccagtgttctccacattctctcatgttcaagaccctgatctcgtggtacaa
gatgtgcatcagagcattaatgcgtcaagaagaaacttaggctacctctcttgcgcttca
ggcaaccccatcgacgactgctggcggtgcgatcccaactgggagaacaaccgccagcgt
ttagcagactgtgctatcggcttcggcaagaatgcaggtggtggcagagacggccgcatc
tatgtcgtcactgaccccggggacgatgatccagtgaacccacggcctggtaccctccgc
cacgctgtgatccaaaacgagccactatggataatcttcaagcgcgacatggtcatacgg
ctaaatcaagaactcgtaatgaactcccacaaaaccatcgacggccgcggcgccagtgtc
catatatcgaacggcccatgcattactattcactacgcgagtaacataattatccatggg
attcacatacatgactgtgtgatagccgggaatgggattatcagagattccccgcagcat
gcagggcactgggaggtttctgatggagatgggatagtcattttcgccgggaaaaatatc
tggatagaccattgctcgttgtcgaattgtaaagacgggctgatagacgtgatccatggg
tccaccgcagtcacgatctcgaataattatttcactcatcatgataaggtgatgttgtta
ggacacagtgatgcgtttgggcaggataagaatatgcaggtgaccattgctttcaatcat
tttggagaagggctggttcaaaggatgcccaggtgtaggcttgggtattttcatgttgtg
aacaatgactatactcattgggaaatgtatgcaattggtggaagcgcttctcctaccatt
tatagccacgggaacagatttcttgcacccaatgataggtttagaaaagaggtgacgaag
cacgaggatgcgccgcaaagcgaatggatacactggaactggatatcagaaggcgatctg
atgttgaacggtgcctttttccggcaatcgggaggtggagcttgggcagcacgttcgaag
gcatcaagtttaagtgctaggccagtttctctcgtgggttcagtcaccagaactgctggg
gcacttacttgcagggctggatctcgttgctag
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