KEGG   Primulina huaijiensis: 140980251
Entry
140980251         CDS       T11038                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
phua  Primulina huaijiensis
Pathway
phua03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    140980251
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phua03400]
    140980251
DNA repair and recombination proteins [BR:phua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     140980251
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA
Other DBs
NCBI-GeneID: 140980251
NCBI-ProteinID: XP_073302079
LinkDB
Position
1:6160334..6166161
AA seq 656 aa
MATVPLVGFLVPLNNDLEEENGSSMPKIPVSTGVNYVGRQCIPTVDKRLSRRHLTIKSMD
DGSADVFVEGTNPVIWRSKNERKKLLSGEKWKIFPGDVIELIPGNYVFRYVSAINKEVET
SPNTNREKRPLNDGSSDSKDHAFSSKKLQKAARNHNVLRPQDSSEDALRFQNSEDKLPLA
FKLLRVKELQEWANANTVSISDVVRGDVLVAILSNYMVDIDWLLSACPTIKRVPHVLVIH
GEGDGTLEYMKRNKPSNWILHKPPLPISYGTHHSKAMFLVYPQGVRVIVHTANLIYVDWN
NKSQALWMQDFPWKDPSSASSGCGFESDLIDYLSALKWPEFNANLPAIGSFSINASFFKK
FDYSSAVVRLISSVPGYHSGSSISKWGHMKLRTILQECTFEKEFEKSPLVYQFSSLGSLD
EKWMAELASSMSAGMTEDQKPLGLGKPLIIWPTVEDVRCSLEGYAAGNAVPSPLKNVEKE
FLKKYWAKWKASHTGRCRAMPHIKTFTRYNGQNLAWFLLTSANLSKAAWGALQKNNSQLM
IRSYELGVLFLPFSGKSKCGFSCTDDESNSEYDFQGKGASARSSEVQKVKLVTLAWKGNF
KEERSDVIQLPVPYELPPRPYSSQDVPWSWDRRYTEKDVYGQVWPRQVKLYTSQDF
NT seq 1971 nt   +upstreamnt  +downstreamnt
atggccaccgttccactggtcggattcttggtacctttgaacaatgatcttgaggaagaa
aatggttcttcaatgcccaaaataccagtttcgacaggcgttaattatgtcggccgccag
tgcattcccactgtcgataagcgccttagccggagacatctcaccatcaagtccatggat
gatggatccgccgatgtatttgttgaaggaactaacccagttatttggaggtccaagaac
gaaagaaagaagcttttgtctggagaaaaatggaagatttttcctggtgatgtcatagag
ttgataccagggaattacgttttcagatatgtgtctgccattaacaaggaagtggaaaca
tccccgaatactaacagagagaaaaggcctttgaatgatggaagcagtgactccaaagat
catgcttttagtagcaagaaattgcaaaaggctgctaggaaccataacgttctgcggcct
caggattcatcggaggatgcacttcgctttcaaaactcggaggataagttacctttagca
tttaaactattgcgagtaaaggaattacaggagtgggcaaatgcgaacactgtttccatc
agtgatgtggttcgaggggatgtgttagtagctatcttatcgaattacatggtagacatt
gattggctactttctgcatgtccgacaattaaaagagtccctcacgttttagttattcat
ggtgaaggtgatggtacgcttgagtatatgaagagaaacaagccttctaattggattctc
cacaagcctcctttaccaatttcatatggaacacatcattccaaagctatgtttcttgtc
tatcctcaaggggtccgagtcattgttcatacagctaatttgatatatgttgactggaac
aacaaaagccaagcattgtggatgcaagattttccatggaaagatccaagcagtgcaagt
agtggttgcggatttgaaagtgacttgattgattacttaagtgcattgaagtggcctgaa
ttcaatgctaatttaccggctattggcagctttagtatcaatgcatcattcttcaaaaaa
tttgattacagcagtgcagtggtcagactcatttcatctgtacctggatatcattctggt
tccagtataagtaaatggggacatatgaagttgcgaaccatcctccaggagtgcaccttc
gagaaggagtttgagaaatctcctcttgtttatcagttttcttcactaggttctttggat
gagaaatggatggctgagcttgcatcttcaatgtcggcaggaatgacagaagatcaaaag
cctttgggactgggaaagccactgataatatggccaactgtggaagacgtccgttgttct
ttagaaggctatgcagctgggaatgcagttccaagccctctaaagaatgtagagaaagaa
ttcttgaaaaagtattgggcaaaatggaaggcaagccacacaggtcgatgtcgtgcaatg
cctcatataaagacattcacacgttataatggtcaaaacctcgcatggtttctgcttact
tcagcaaacctcagcaaagctgcctggggagctcttcagaaaaacaattcccagctgatg
atccgttcttacgagcttggagtactctttttgcctttttccggtaaatctaaatgtggt
ttttcttgcacagacgatgaaagtaactcagagtatgattttcagggcaaaggtgcatca
gcaagaagttctgaggtgcagaaagtgaaactggtcaccttggcttggaaaggaaacttt
aaggaagaacgtagtgatgtaattcaattgcccgtgccttatgaacttcctccaaggcca
tattcctctcaagatgtaccctggtcgtgggatcgaaggtatacagagaaggatgtgtat
ggccaagtttggcccaggcaagtgaaactgtatactagtcaagatttctga

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