KEGG   Primulina huaijiensis: 140981085
Entry
140981085         CDS       T11038                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
phua  Primulina huaijiensis
Pathway
phua03018  RNA degradation
phua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140981085
  09123 Folding, sorting and degradation
   03018 RNA degradation
    140981085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phua03019]
    140981085
   03041 Spliceosome [BR:phua03041]
    140981085
Messenger RNA biogenesis [BR:phua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     140981085
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     140981085
Spliceosome [BR:phua03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    140981085
 Complex C
  U2 snRNP components
    140981085
SSDB
Motif
Pfam: LSM SM-ATX DUF150_C LSM14
Other DBs
NCBI-GeneID: 140981085
NCBI-ProteinID: XP_073303443
LinkDB
Position
7:23563811..23565633
AA seq 93 aa
MLFFSYFKELVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPEGVDVELLHDATRREARGV
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttctcatacttcaaggaattggttggcagagaagtgacggttgaattgaag
aacgatttagcgatcagagggacccttcattcggtggatcaatatttgaatataaagctc
gaaaacaccagggttgttgatcaagacaagtacccccacatgctctctgtacgtaattgc
ttcatcagaggatcggtggttcggtacgtccaattgccaccggagggagttgatgtggaa
ttgcttcacgatgccactagaagagaagctcgtggcgtctag

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