Primulina huaijiensis: 140981085
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Entry
140981085 CDS
T11038
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
phua Primulina huaijiensis
Pathway
phua03018
RNA degradation
phua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140981085
09123 Folding, sorting and degradation
03018 RNA degradation
140981085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140981085
03041 Spliceosome [BR:
phua03041
]
140981085
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140981085
mRNA degradation factors
5'-3' decay
Lsm complex
140981085
Spliceosome [BR:
phua03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
140981085
Complex C
U2 snRNP components
140981085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
LSM14
Motif
Other DBs
NCBI-GeneID:
140981085
NCBI-ProteinID:
XP_073303443
LinkDB
All DBs
Position
7:23563811..23565633
Genome browser
AA seq
93 aa
AA seq
DB search
MLFFSYFKELVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPEGVDVELLHDATRREARGV
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcttctcatacttcaaggaattggttggcagagaagtgacggttgaattgaag
aacgatttagcgatcagagggacccttcattcggtggatcaatatttgaatataaagctc
gaaaacaccagggttgttgatcaagacaagtacccccacatgctctctgtacgtaattgc
ttcatcagaggatcggtggttcggtacgtccaattgccaccggagggagttgatgtggaa
ttgcttcacgatgccactagaagagaagctcgtggcgtctag
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