Pangasianodon hypophthalmus (striped catfish): 113524936
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Entry
113524936 CDS
T05759
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00310
Lysine degradation
phyp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
113524936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113524936
03036 Chromosome and associated proteins [BR:
phyp03036
]
113524936
Enzymes [BR:
phyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
113524936
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
113524936
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
113524936
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
113524936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_11
Zn-ribbon_8
zf-met
zf_UBZ
SET
Zn_ribbon_SprT
zf_PR_Knuckle
zf-C2HC_2
DZR
C1_4
Motif
Other DBs
NCBI-GeneID:
113524936
NCBI-ProteinID:
XP_026767136
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MQLSSSSSGSSLGDGSDAVKDEDFLYCEVCKSSFVKECEVHGPPLFIPDTPVPMGVADRA
RQTLPAGLEVRKSSIPDSGLGVFSKGETVPVGAHFGPYQGELVDREEASAYSWVISRSRQ
CEEYIDARNENRANWMRYVNCARNEEEQNLVAFQYRGGILYRCCQPIKPGQELLVWYEEE
YSKDHDFTLDFLKKKKCSNDEMKDTLLLQVFSCSLCSLSYSSRIYLDNHMRRCHNEEFVR
QQKSGQIKYDDDDDDNNNNLKAAEKSTSQQISSCSLSHGQNQEEVYHCSECGKSFTSQSN
LRRHQRIHTAEKPYDCSQCGKSFTEQRALQQHQLLHTGVKSYHCSQCGKTFNHLSNFQRH
QRVHTGEKPFPCSQCRKSFTQKSHLKLHQRIHTGEKPFQCSECGKSFTHHYPLQQHERTH
TGEKPYHCSYCGRSFNHQSSLKEHQRIHTGEKPYRCSECGKSFTRLKGLQQHQHTHTGEK
PFHCRQCGKSFTEQRTLRRHQRIHTGEKPYRCSQCGKSFTYDSSLQRHQQVHTGVKPYYC
LQCGKTFTHQSGLQRHQRIHTGEKPYRCSLCGKSFTQNSHRKQHERLHAAGSLDYSSTLK
AHNCPNTEM
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgagcagctccagcagtggcagcagtctcggtgacggatcagacgctgttaaa
gatgaagacttcctgtactgtgaggtctgtaaatcctccttcgtgaaggagtgtgaggtt
cacgggccgcctctcttcatccctgatacccctgttcccatgggggttgctgatcgagcc
agacaaacccttccagctggtctagaagttcggaagtccagtattcctgactcgggcctg
ggagtgttcagtaaaggggaaacggttccggttggtgctcacttcgggccgtatcagggc
gagctggtggacagagaggaagccagcgcctactcttgggtgataagcaggagcagacag
tgtgaagaatacatagatgccagaaacgagaatcgtgctaactggatgaggtacgtaaat
tgtgctcgtaatgaagaagagcagaatctggtggcgttccagtatcgaggaggaattctc
taccgctgctgtcaacccatcaaaccaggacaagagctcctggtgtggtacgaagaagag
tactccaaagatcacgactttactttggatttcctcaagaagaaaaagtgctccaacgat
gaaatgaaagacaccttattattgcaagtcttctcctgctccttgtgttcactttcctat
tcaagccgaatttacctcgacaaccacatgaggagatgccacaatgaggaatttgtgaga
cagcaaaaatcgggacagattaaatatgacgatgatgatgatgataataataataatctg
aaggctgcagaaaagtccaccagtcagcaaatctcttcatgtagtctctctcatggccag
aatcaggaagaggtttatcactgctccgagtgtggaaagagttttacttcccagagtaat
ctcaggcgacaccagcgcatccacaccgcagagaaaccatatgactgctcacagtgtggg
aagagttttacagaacagcgtgctctccagcaacaccagctcctccacacaggagtaaaa
tcatatcactgctcacagtgtggaaagactttcaatcacctgagcaatttccagcgacac
cagcgcgtccacacgggagagaagccatttccctgctctcagtgcagaaagagttttact
cagaagagccatctcaaactgcatcagcgcattcacacgggagagaaaccgtttcagtgc
tcagagtgcgggaagagttttactcaccactatcctctccaacagcacgagcgtactcac
accggagagaagccgtatcactgctcgtactgcgggaggagtttcaatcatcagagctct
ctcaaagagcaccagcgcatccacacgggggagaagccgtaccgctgctcggagtgcggc
aagagctttactcgcctgaaggggctccagcagcaccagcacactcacaccggagagaaa
ccgtttcactgccgacagtgtgggaagagcttcacggagcagaggacgctccgacgacac
cagcgcattcacaccggagagaaaccgtatcgctgctctcagtgcggaaagagtttcact
tacgacagcagtctgcagcgacatcagcaggtccacaccggcgtgaagccgtattactgc
ttacagtgcggaaagaccttcactcaccagagcggtctgcagagacaccagcgcattcac
acgggagagaagccgtaccgctgctcactgtgcggcaagagctttactcaaaacagtcat
cgtaagcaacacgagcgtcttcacgcggcaggcagtctcgattactcaagcacccttaag
gcacataactgtcctaatacggagatgtga
DBGET
integrated database retrieval system