KEGG   Pangasianodon hypophthalmus (striped catfish): 113524936
Entry
113524936         CDS       T05759                                 
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
  KO
K20796  [histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:2.1.1.354]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00310  Lysine degradation
phyp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    113524936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:phyp03000]
    113524936
   03036 Chromosome and associated proteins [BR:phyp03036]
    113524936
Enzymes [BR:phyp01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.354  [histone H3]-lysine4 N-trimethyltransferase
     113524936
Transcription factors [BR:phyp03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    113524936
Chromosome and associated proteins [BR:phyp03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    113524936
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     113524936
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 PRDM2_PR zf-C2H2_4 zf-C2H2_jaz zf-C2H2_6 zf-C2H2_11 Zn-ribbon_8 zf-met zf_UBZ SET Zn_ribbon_SprT zf_PR_Knuckle zf-C2HC_2 DZR C1_4
Other DBs
NCBI-GeneID: 113524936
NCBI-ProteinID: XP_026767136
LinkDB
Position
Unknown
AA seq 609 aa
MQLSSSSSGSSLGDGSDAVKDEDFLYCEVCKSSFVKECEVHGPPLFIPDTPVPMGVADRA
RQTLPAGLEVRKSSIPDSGLGVFSKGETVPVGAHFGPYQGELVDREEASAYSWVISRSRQ
CEEYIDARNENRANWMRYVNCARNEEEQNLVAFQYRGGILYRCCQPIKPGQELLVWYEEE
YSKDHDFTLDFLKKKKCSNDEMKDTLLLQVFSCSLCSLSYSSRIYLDNHMRRCHNEEFVR
QQKSGQIKYDDDDDDNNNNLKAAEKSTSQQISSCSLSHGQNQEEVYHCSECGKSFTSQSN
LRRHQRIHTAEKPYDCSQCGKSFTEQRALQQHQLLHTGVKSYHCSQCGKTFNHLSNFQRH
QRVHTGEKPFPCSQCRKSFTQKSHLKLHQRIHTGEKPFQCSECGKSFTHHYPLQQHERTH
TGEKPYHCSYCGRSFNHQSSLKEHQRIHTGEKPYRCSECGKSFTRLKGLQQHQHTHTGEK
PFHCRQCGKSFTEQRTLRRHQRIHTGEKPYRCSQCGKSFTYDSSLQRHQQVHTGVKPYYC
LQCGKTFTHQSGLQRHQRIHTGEKPYRCSLCGKSFTQNSHRKQHERLHAAGSLDYSSTLK
AHNCPNTEM
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgcagctgagcagctccagcagtggcagcagtctcggtgacggatcagacgctgttaaa
gatgaagacttcctgtactgtgaggtctgtaaatcctccttcgtgaaggagtgtgaggtt
cacgggccgcctctcttcatccctgatacccctgttcccatgggggttgctgatcgagcc
agacaaacccttccagctggtctagaagttcggaagtccagtattcctgactcgggcctg
ggagtgttcagtaaaggggaaacggttccggttggtgctcacttcgggccgtatcagggc
gagctggtggacagagaggaagccagcgcctactcttgggtgataagcaggagcagacag
tgtgaagaatacatagatgccagaaacgagaatcgtgctaactggatgaggtacgtaaat
tgtgctcgtaatgaagaagagcagaatctggtggcgttccagtatcgaggaggaattctc
taccgctgctgtcaacccatcaaaccaggacaagagctcctggtgtggtacgaagaagag
tactccaaagatcacgactttactttggatttcctcaagaagaaaaagtgctccaacgat
gaaatgaaagacaccttattattgcaagtcttctcctgctccttgtgttcactttcctat
tcaagccgaatttacctcgacaaccacatgaggagatgccacaatgaggaatttgtgaga
cagcaaaaatcgggacagattaaatatgacgatgatgatgatgataataataataatctg
aaggctgcagaaaagtccaccagtcagcaaatctcttcatgtagtctctctcatggccag
aatcaggaagaggtttatcactgctccgagtgtggaaagagttttacttcccagagtaat
ctcaggcgacaccagcgcatccacaccgcagagaaaccatatgactgctcacagtgtggg
aagagttttacagaacagcgtgctctccagcaacaccagctcctccacacaggagtaaaa
tcatatcactgctcacagtgtggaaagactttcaatcacctgagcaatttccagcgacac
cagcgcgtccacacgggagagaagccatttccctgctctcagtgcagaaagagttttact
cagaagagccatctcaaactgcatcagcgcattcacacgggagagaaaccgtttcagtgc
tcagagtgcgggaagagttttactcaccactatcctctccaacagcacgagcgtactcac
accggagagaagccgtatcactgctcgtactgcgggaggagtttcaatcatcagagctct
ctcaaagagcaccagcgcatccacacgggggagaagccgtaccgctgctcggagtgcggc
aagagctttactcgcctgaaggggctccagcagcaccagcacactcacaccggagagaaa
ccgtttcactgccgacagtgtgggaagagcttcacggagcagaggacgctccgacgacac
cagcgcattcacaccggagagaaaccgtatcgctgctctcagtgcggaaagagtttcact
tacgacagcagtctgcagcgacatcagcaggtccacaccggcgtgaagccgtattactgc
ttacagtgcggaaagaccttcactcaccagagcggtctgcagagacaccagcgcattcac
acgggagagaagccgtaccgctgctcactgtgcggcaagagctttactcaaaacagtcat
cgtaagcaacacgagcgtcttcacgcggcaggcagtctcgattactcaagcacccttaag
gcacataactgtcctaatacggagatgtga

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