Pangasianodon hypophthalmus (striped catfish): 113525630
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Entry
113525630 CDS
T05759
Name
(RefSeq) sodium channel protein type 1 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113525630
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
113525630
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
Lustrin_cystein
IQ
Synaptonemal_3
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
113525630
NCBI-ProteinID:
XP_026767997
LinkDB
All DBs
Position
Unknown
AA seq
1972 aa
AA seq
DB search
MAQILAPPGPHSFRPFTRESLKAIEKRIAEEKSKKPKKGAQEGNTNDEDQPQPNSDLAAG
KKLPFIYGDIPEGMVSTPLEDLDPFYCNQKTFIVLNKGKAIFRFNATSALYLLSPFNPLR
RISIKILVHSLFSIIIMCTILANCVFMTFTERTELRSLFKNIEYTFTAIYTFDSLIKILA
MGFCIGKFTFLRDPFNWLDFTVIVMAYVTEFGNGLGNVSALRSFRVVRALKTISVIPGLK
TIVGALFQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCIKIPTDGIINEKGQLVF
TGNFTEFNLTQYYNDKDNYYKIEGKKDPLLCGNNSDAGQCPDGYFCHKAGTNPNYGFTSF
DSFGWAFLSLFRLMTQDYWENLYQQTLRASGKIYMIFFVLVIFLGSFYLVNLILAVVAMA
YDEQNQATLEEALQKEEKFQAMMEQLRRQQAEAQAAVAVFESGKLSGDSSSEASKLSSKS
AKERCNRRKKRKQREEEGVKGDNEKVHNSDPENNIRRTSFRYSVDGNILSYDRTYQSPHQ
SLVSIQGSVFSPRRNSRTSIFTFRGRLGSENGFADDEHSAFEDTGSRRGSLFLPRCSERL
YSTGSRNSLTPRVFLSPNGKVRSSVDCNGTVSYVTGNSLPSSPDVLQLPEVIIDKATTDD
NRKKEEYRRRYDAEQLSPGFLNDQTARQRAMSVASIITNTMEELEDSRRKCHPCWYKFTK
AFLIWDCFPAWVKIKRLVHLFVMDPFVDLFITICIVINTVFMAMEHHNKAEYFVTVLTVG
NYVFTGIFTAEMIFKIIALDPYKYFQESWNIFDSVIVTLSIMELGLENVPGMSVLRSFRL
LRVFKLAKSWPTLNMLIKIIHNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYTSNKCKI
SSECSLPRWHMSDFFHSFLIVFRVLCGEWVETMWDCMMVAGQAMCLTVFLMVMVIGNLVV
LNLFLALLLSSFSADNLAATNDDCEMNNLQIAMGRIRKGVAFIKARLHSFFHSSCLRRRE
NKVKEEDGPKDAKMLADMSTHTTVELIKDPGCEKEASGADTGSENFIFDPTLSVSVPIAT
ADSDPECQNMDDLSSYSSDMEEDKERMSEGMSSSEGSTVDLRPLKERRESLDFELELPVD
DPEACFTQGCVNRFLCCQVNVEKGKWKTWWNIRHTSYRIVEHNWFESFIIFMILLSSAAL
AFEDIHIEKRKTIKTVLEYADKVFTYIFILEMLLKWLAYGFAKYFTNAWCWLDFLIVGVS
LISLVASALNYSELTAIKSLRTLRALRPLRALSRFEGMRVVVNALFGAIPSIVNVLLVCL
IFWLIFSIMGVNLFAGKFYECVNATSGIRLNESLVSNKNECLQLGQSARWKNLKINFDNV
GAGYLALLQVATFKGWTDIMYAAVDNRGVDQQPQYEASLYYYIYFVVFIIFGSFFTLNLF
IGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKLQALLFDIV
TNQAFDIFIMVLICLNMITMMVETEDQSQDIRSHLKKINMVFVVIFTMECVLKMIALRQY
FFTVGWNIFDFVVVILSIVGTFVSEVIKYLFSPTLIRVVRLARIGRILRLIKSAKGIRTL
LFALMMSLPALFNIGLLLFLVMFIYAIVAMSQFAYVKKEAGIDDMFNFETFGNSMLCLFQ
ITTSAGWDGLLSPILNRYPDCDPQKDHPGSQVKGDCGNPAIGIIFFVSYIIICFLIVVNM
YIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFIEYKQLSDFADALDPPLR
IPKPNKIQLINMDLPIVSGERIHCLDILFAFTKRVLGESGDMDVLRGQMEDRFMASNPSK
ESYEPITTTLRHKHEDMSAVVIQRAYRMHVRRHNVKIGPNTYKEAVQENGMVSNKVPVVT
DRCNDHSASDKSDTSSSTIVPPSYASVTQSGKNKYEKDKREKEIKGKDNKQR
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atggcacagattcttgcaccgccgggaccacacagcttccgcccgtttacccgggagtcg
ctcaaggccattgaaaaacgaattgcagaggagaagagtaaaaagcctaaaaaaggagcg
caagagggaaatactaatgatgaggatcagccacaacctaacagtgatctggcggcaggg
aagaaattgccgtttatatatggggacattccagaaggaatggtgtccacaccactggaa
gatctggacccattttattgcaatcagaaaacctttatagtattgaacaaagggaaggca
atcttccgctttaatgccacttctgccttgtacttgctaagtccattcaacccactcaga
agaatatcaattaagattttggtgcattcattgttcagcataataatcatgtgcactatc
cttgcaaactgtgtgtttatgaccttcactgaacgcacggagcttcgatccttgttcaag
aatatagagtacacgtttactgcaatatatacatttgattcattaataaagatcttagcc
atgggcttctgtatagggaagtttaccttcctcagagacccattcaactggttggacttc
actgtgattgtaatggcgtatgtgacagagtttggcaacggtttgggtaatgtctctgct
ttgagatctttcagagttgttcgggccctgaaaacaatatcagttatcccaggcctgaag
accattgtaggagctctgttccagtcagtaaagaaactttcagatgtgatgattctgact
gtcttttgtttgagcgtatttgcactgattggcctgcagctttttatgggcaacctgagg
aataaatgcataaagataccaaccgatggcattataaatgagaagggacagctggttttt
actggaaacttcactgagttcaacctcacacaatattataatgataaggataattattat
aaaattgaaggaaagaaagatccactgctctgtggaaataacagtgatgcagggcaatgc
ccagatggttatttctgtcacaaagcaggcaccaatccgaattatggcttcaccagcttc
gacagctttggttgggctttcctctctctcttcagactgatgactcaagactactgggaa
aatctctaccaacagactcttcgagcttcagggaagatctatatgatcttctttgtgctg
gtgatattcctgggatcgttctacctggtgaatctgatcctggctgtggtggctatggcc
tatgatgaacagaaccaggccaccctggaggaggctctgcaaaaagaggaaaagttccag
gctatgatggagcagctcaggaggcaacaagcagaggcccaggcggcagttgcggtattt
gagagtggcaagcttagtggagacagttcctctgaagcctccaaactcagttccaaaagt
gccaaagaacgatgcaacaggagaaagaagaggaagcaaagagaggaggagggggtgaaa
ggggacaacgaaaaggtccacaattctgacccagagaacaacattagaaggaccagcttc
cgatattctgtggatggaaacatactgtcatatgataggacatatcaatcccctcatcag
tcacttgtgagtattcagggctcagtcttctctccacgccgcaacagtaggactagcatc
tttacctttcgtggccgcctgggatcagagaatggatttgcagatgatgagcacagtgcg
tttgaggacacaggcagccgccgtggctcgttgtttctgccacgctgctctgagcgtctt
tacagtactggcagtaggaacagcttgaccccgcgtgttttcctgtccccaaatggaaaa
gtgcgcagctctgtggattgcaatggcacagtgtcatatgtgactggtaactcactgccc
agctctccagatgttctgcagttgcctgaagtgatcatagataaagccactacagatgac
aataggaaaaaagaggagtacaggaggagatatgatgccgaacagctctcaccagggttt
ttgaatgaccagacagccagacagcgggctatgagtgtagctagtattatcaccaacaca
atggaagagctggaggattcgaggcggaagtgccatccatgttggtataagtttacgaaa
gcatttctgatctgggattgctttccagcatgggtgaaaatcaagagattagttcacttg
tttgttatggacccatttgtggatctgttcatcaccatctgcattgtaatcaatacagta
ttcatggccatggagcaccacaacaaggctgaatattttgtgacagtccttacagtgggc
aactatgttttcacagggatctttacagctgagatgatcttcaagattatagccttggat
ccttataaatacttccaagaaagctggaatatatttgatagtgtcattgtaaccctgagt
attatggagcttgggttggaaaatgtacctggaatgtctgttcttaggtcatttcgtttg
cttagagtctttaagctggctaagtcttggcccactttaaatatgctgatcaaaataatt
cacaactcggtgggtgcccttggcaacctgacgctcgtcttggccatcattgtcttcatc
tttgccgtagtaggcatgcagttgttcgggaagagttacacaagcaataagtgtaagatt
tcatcagagtgcagtctccctcgctggcacatgagcgatttcttccactcctttctaata
gtgttccgtgtgctgtgtggtgagtgggtcgaaactatgtgggactgcatgatggtggct
ggacaggccatgtgcctaactgtcttcctcatggtcatggtgattggaaaccttgtggtt
ttgaacctcttcctcgccttgctgcttagctcttttagtgccgataacctggcagctaca
aacgatgactgtgaaatgaacaacttgcagattgctatgggtcgcatccgcaagggtgta
gcgttcattaaagcccgtctgcacagcttctttcacagcagctgccttagaagaagagag
aataaggtaaaggaggaagatggcccaaaagatgccaagatgctggctgatatgtctact
cataccacagtggagctgattaaagacccagggtgtgagaaagaggcatcaggtgcagac
actggctctgagaatttcatcttcgatcccaccttgtctgtctctgtaccaatagccact
gcagactctgaccctgagtgccagaacatggatgatttaagcagttactcttctgacatg
gaggaagataaagagaggatgtcagaaggtatgagctcttcagagggcagcacagtggac
ctccggcccctgaaggagagaagagaatcacttgactttgagcttgaattacctgtggat
gatcctgaggcctgttttacacaaggctgtgtgaacaggtttctttgttgccaggtgaat
gtggaaaaaggcaaatggaagacgtggtggaacatcaggcacaccagttacaggatagtg
gagcataactggtttgagtcattcatcatctttatgatcctgttgagcagcgcagcactg
gcctttgaagacatacacattgagaaaaggaagactataaagactgttttggaatatgca
gataaagtgtttacctacatcttcatattggagatgcttttgaaatggctggcgtatgga
tttgctaaatacttcaccaatgcctggtgctggcttgatttcttgatagtgggcgtctct
ctgatcagcctagtggccagcgccctcaattattcagagctcactgccatcaaatctctc
cgtacactgcgagcactgagacctcttcgcgctctatcacgctttgaaggcatgagggtg
gtggtcaacgccctttttggtgccattccctccatcgtgaatgtgctgcttgtctgtctc
atcttctggctcatctttagcatcatgggtgtcaacttgtttgctggaaagttttatgaa
tgtgtgaatgcaacctccggcattcgcctgaatgaaagcctggtctcgaacaaaaacgaa
tgtctgcaactaggccaaagtgcacggtggaaaaatttaaagatcaactttgataatgtt
ggagcaggatatctggctttgctgcaagtggcaactttcaaaggctggacggatattatg
tatgctgcagtagacaatcggggtgtagatcaacagcctcagtatgaggcaagtctgtac
tactacatctactttgtagtcttcatcatattcgggtccttcttcacattgaaccttttc
attggcgtcattattgacaacttcaatcagcaaaagaaaaagtttggaggtcaggacatt
tttatgacagaggaacagaagaaatattacaacgctatgaagaaacttggttcgaagaag
ccacaaaaaccaattccccggccatcaaacaagctccaggctcttctctttgacattgta
acaaatcaagctttcgacatcttcattatggtgcttatatgccttaatatgatcactatg
atggtggaaacagaagatcagtcccaagacatacgcagtcatctgaagaagatcaacatg
gtgtttgtggtaatcttcacaatggaatgtgtacttaagatgattgcacttcgacagtac
ttcttcactgttggctggaacatctttgactttgtagtggtcattctctcaatagttggc
acatttgtctctgaagtcattaagtacctgttttctccaaccttgattcgtgttgttcga
cttgctcggattggccgaattcttcggctcatcaaaagtgccaagggaatacgcaccctt
ttgtttgccttaatgatgtctctcccagccctattcaacatcggtcttcttctcttctta
gtcatgtttatctacgcaattgttgccatgtcacaatttgcctatgtcaagaaggaggct
ggaattgatgacatgtttaactttgagacttttggcaacagcatgttatgtttgtttcag
atcactacctctgcagggtgggatggactcctgtcacccattcttaacaggtaccctgat
tgtgacccacagaaggatcaccctggcagccaagttaaaggtgactgtggcaacccagct
attggtatcatcttctttgtgagctacattataatatgcttcttgatcgtggtgaacatg
tacatagctgtgatccttgagaacttcagtgtggccacagaggagagtgcagagccatta
agtgaggatgactttgaaatgttctatgaggtgtgggaaaaatttgatcctgacgctaca
cagttcatagaatacaaacagttgtctgactttgctgatgcccttgacccacctctgcgt
atacctaagcccaataagatccagctgattaatatggacctaccgatagtaagtggggag
cgaatccactgcctggacatcttgtttgcatttacaaagcgtgtcctgggagaaagtggt
gacatggatgtccttcgtggacagatggaggaccgtttcatggcctctaacccttccaag
gaatcttatgagcccatcactacaactctacgacacaagcatgaggacatgtcagctgtc
gtcattcagcgggcctaccggatgcatgtacggagacacaatgtaaaaataggccccaac
acatacaaagaagctgtacaggagaatggaatggtttcaaacaaggtcccagtggtgaca
gacaggtgtaacgaccactctgcttcagacaaatctgacacatcatcctctaccattgtc
ccaccatcatacgccagtgtaacacaatctggtaagaacaaatatgagaaagacaagagg
gaaaaggaaataaaaggaaaagataacaagcagcggtaa
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integrated database retrieval system
