Pangasianodon hypophthalmus (striped catfish): 113526683
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Entry
113526683 CDS
T05759
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
113526683
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113526683
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113526683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
113526683
NCBI-ProteinID:
XP_026769763
LinkDB
All DBs
Position
Unknown
AA seq
1499 aa
AA seq
DB search
MASTYVSPSKGSVALVFVSPSEKGMASVPVNLSKGVASLPVCPSEDSVASVSISPSEGDV
ATANASPSEGEEMFSYPSAIRWRDSEPGACGRNSGMANRSAKFGYRHTTRLESSEPLTDL
QGFERQELIGYQPERRTAISALQTSGFKPGATSRAFLLRLKPLAESFARVLNHQIQQGPV
TLIKVMLLAHGNQPKKPSPAQQEFLQLPPTQFIPSPSEGGVTSVLVTPSEGGVTSVLVTP
SEGGVACVMVRPSKGAMACVMVPKVVPEVKVEHTEIKEVKVVKVEPEPPPPVPAVEVVPD
AESEGDKNLTPRVMDWIKQSFEKVVPQPGHSPSITDTADKKEPVTDPAPQPPKAPEPSAA
EDATKGTNVEEESNVVGWIVQGLGRIMPQPVLKPKEDSSDTVQSICILQEDFVQDDNLVL
EENLVLEENLVLEENLVVEENLVLERDMVLEEVDSDSEQQQVEQGCLLDAELEKQTEAQM
EDQIRPLLDVVHNTAPNILVTQQEDAETQTERWTPLIENIRREAEEAALVSMQERLERER
LEAARMAEELARQAAELAVRQLEEEHTVIRVTEPERQSEPDNGEQLSNIQEEENEDEPEL
QPLREESEEDSGDSKNAECLVDVCPVEELETHKTEITQQIPQKEESPEPLPQKESTPASQ
PEMGHTPPLEPAVQPEPDGEDHARAKSPSPVGYSVVTSPSPVVSPVVTTQPETAASGPSP
PVVIQEDEALNEECGECPHVNVEEVDDGSIPTVPQIVEPQESNGVTLTVPVPVMATQRSV
PQPDEQVEESEKEKEEDLTPQRGLLTVEEDDSERPLSSASQTSVVVNERLQELIKLFKER
TERTKERLTDPDESEEESPSATPTKKAAAPPPPPPPPPEEKKDVPSGDESEEEQFLEFMG
YQVKVPKVPPMPDWLKAIVEYRFPSSIDPYTDMIYVVWLFFVMCAWNYNVWLIPVRWAFP
YQTSENIHLWLLADYLCDTIYILDIVVFQPRLQFVRGGDIVCDKKDMRENYMKTERFKMD
MISLLPLDVLYYFTGVKSILRFPRILKYMAFFEFNDRLEAVMKKAYIYRVIRTTAYLLYS
LHCNACLFYWGSDYEGLGSTKWVYDGRGNSYIRCYYFAVKTLITIGGLPDPTTVFEIVFQ
LVNYFVGVFAFSIMIGQMRDVVGAATAGPAYYRSCVDSTVKYMTAYGIPREVQNRVKTWY
DYTWQSQGMLDEQELLIQLPDKMRLDIAVDVNYIIVSKVALFQGCDRQMIFDMLKRLKSV
VYLPGDYVCKKGEIGREMYIIKAGEVQVVGGPDGKTVFVTLRAGSVFGEISLLAVGGGNR
RTANVVAHGFANLFILDKKDLSEIMVHYPESQKILRKKAKKLLTKDKKPPEEKGSGKESG
QVIPTRPETPKLFKAALVVGKGETFAKLKETYKETGATLQPAGSTAAPVPPPSPVHRRSP
IQRTVTQDDDDDMVAQTTDSTVVIRMTPHQHGEEILSVEMAEEEDGKAEKTEQEEKKEE
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaacgtatgtcagtcccagtaaaggaagtgtggccttagtgtttgtcagtccc
agtgaaaaaggcatggcctcggtgcctgtcaatctcagtaaaggtgtggcttctctgcct
gtctgtcccagtgaagacagtgtggcctcagtgtctattagtcccagtgaaggggatgta
gccacagctaatgctagtcccagtgaaggagaagagatgttctcctacccctcggccatc
agatggcgtgactcagagcctggagcttgcgggagaaacagtggaatggccaacagaagt
gcaaagtttggctacaggcacaccaccaggctggagagcagcgaacctctgacagatctg
cagggctttgaaagacaagagctcattggttaccaaccagagagacgtactgcaattagt
gccctccagacgtctgggttcaagcctggcgccacctcacgtgcatttttgttgcggttg
aagccgctggctgagtcttttgccagggtgctgaaccaccaaatacagcaaggtccagtc
actctcataaaagtaatgctgttagcacatggcaatcaacccaaaaaaccaagtccagcc
cagcaggaattcttacagttaccacccacacagtttatcccaagtcccagtgaaggaggc
gtgacctctgtgctggtcactcccagtgaaggaggcgtgacctctgtgctggtcactccc
agtgaaggaggcgtggcctgtgtgatggtcagacccagtaaaggagccatggcctgtgtg
atggttcccaaagtggtgccagaggtaaaggtggagcacactgaaattaaagaggttaaa
gtggttaaagtggagcctgagcctccacctccagtccctgcggtggaggtggttcctgat
gcagaatctgaaggagacaagaacttaactcccagggtgatggattggataaagcaaagt
tttgagaaggtggttccgcagccaggacactctccatctattacagacactgcagataaa
aaggaacctgttacagatcccgcacctcagcctccaaaggcacctgaaccctcagcagct
gaggacgcaactaagggaaccaatgtggaggaagaatccaacgtggttggctggattgtg
cagggactcggtcgcattatgccacagcctgttctgaaaccaaaagaggactcttcggat
acagttcagagcatctgcatcctgcaggaggactttgtacaggatgacaacctggtgctg
gaggagaacctggtgctggaggagaacctggtgctggaggagaacctggtagtggaggag
aatctggtgctggagagggacatggtgctggaggaggtggactcagactcggagcagcag
caggtggagcaaggctgtttgctcgatgctgagctggagaaacagaccgaagctcagatg
gaggatcagattcgccccctgctggatgtcgtacacaacaccgcacctaatatcttggtc
acacagcaggaggatgctgagacacaaacagagcgctggactcctctaatagagaacatt
agacgcgaggctgaggaagccgccttggtctccatgcaagagaggctggagcgtgagcgt
ctggaggcggcgaggatggcggaggagttggcacgccaggctgctgaactggcagtgaga
cagctggaggaggaacacactgtaatcagagtcacagagccagaacgtcagtctgaacca
gacaacggagagcaactctccaacatccaagaggaagagaatgaagatgaaccagagtta
cagccactacgtgaggagagtgaggaagacagcggggacagtaaaaatgctgagtgtctg
gtggatgtgtgccctgttgaggagcttgaaacacacaaaactgagattacacagcagatt
ccacaaaaggaggagtcaccagagccacttcctcaaaaggaatctactcctgcaagtcaa
cctgagatgggacacaccccaccactagagccagctgtccagccagaacctgatggagaa
gatcatgcaagagcaaagagcccttcacctgtagggtattcagttgttacaagcccttca
cctgtagtgtctccagttgtaaccactcagcctgaaacagctgcttcaggtccctctcct
ccagtggttatacaggaagatgaggcacttaatgaggaatgtggagaatgtcctcatgtg
aatgtagaggaagtcgatgatggatccattcctactgtacctcaaattgttgaaccccag
gagtcgaacggtgtcaccctcactgttcctgttcctgtgatggccacccagaggagtgtt
ccccaaccagatgaacaagttgaagagagtgaaaaggagaaagaggaagatctgaccccc
cagcgtggcctcctcactgtggaggaagacgattctgagcgtcctctctcttcggccagt
cagacaagtgttgtggttaacgaacgtctgcaggagctaatcaagctgtttaaggaacga
acagaacgaactaaagagagactgactgacccagatgagtctgaagaagagagtccctca
gcaacacctaccaaaaaggctgctgctcctccgcctcctccacctcctccccctgaggag
aagaaagatgttccgtctggagatgagagtgaagaagagcagttcctggagttcatgggc
taccaagtcaaagtgcccaaggtgcccccgatgccagactggctgaaagccatcgtggag
tatcgttttccttccagcatcgacccttacactgatatgatctacgtggtgtggctgttt
ttcgtgatgtgtgcgtggaactataacgtgtggctgatcccggtgcgttgggctttcccg
tatcaaacttcagagaacatccacctgtggctgctagctgactacttatgtgataccatc
tacatcctggacattgtggtcttccagcccaggctacagttcgtccgcgggggagatata
gtgtgtgataaaaaggatatgagagaaaattacatgaaaacagaacgatttaagatggac
atgatcagtcttttgcccctggacgttctgtactatttcacaggcgttaaatccattctg
cgcttcccacgtattttaaagtacatggcattctttgaatttaatgatcgtctggaggca
gtgatgaaaaaagcctacatttacagagtgatccggaccaccgcgtacttgctctactca
ctgcactgcaacgcctgtctgttctactggggctctgattatgaaggtctcggctccacg
aagtgggtctatgatggcagaggcaacagttatatccgctgctactactttgccgtaaaa
actctgatcactattggaggtctcccagatcccacgacagtttttgaaatcgtctttcag
ctggtcaattactttgtgggtgtgttcgctttctcgattatgattggtcagatgagagat
gttgtaggagcagctactgcaggtccggcgtactacaggtcatgtgtggacagcacagta
aagtacatgaccgcctatggcatcccacgtgaggttcagaacagagtcaagacttggtat
gactatacctggcaatcacaaggcatgctggatgaacaggagttgctcatacagctgcct
gataagatgcgtctggacatcgctgtggatgtgaactacatcattgtcagcaaagtggcc
ctcttccaaggttgtgacagacagatgatatttgacatgttgaagagactgaagtctgtg
gtctacctcccaggagactatgtgtgtaagaagggtgagattggcagggagatgtacatc
atcaaagctggagaggtgcaggtggttggaggccccgatggtaaaactgtgttcgtgact
ttgagggctggatctgtgtttggggaaatcagcttgctggctgtgggtggagggaacagg
cgcacagctaatgtggtggcacacggctttgctaatctcttcatcctggataagaaggac
ctctctgagatcatggtgcactaccccgagtcccagaaaatactgcgcaagaaggccaag
aagttgctaacgaaggataagaagcctccggaagagaagggttcgggtaaggaatctggt
caggtgatcccaacacgtccagagactcccaaactgtttaaggccgctctggtggtgggc
aaaggagaaacgttcgccaaactgaaggagacctacaaagagactggagccacactacag
cctgctggcagcacagcagcacccgtgccccctccctcacccgttcaccgtcgctcaccc
atccagcgcacagtcacacaggatgatgatgatgacatggtggcacagaccacggacagc
acggtggtcatccgtatgaccccacaccaacatggagaggagatcctaagcgttgaaatg
gcggaggaagaagatggaaaggctgagaagacagagcaagaggagaagaaagaagaatag
DBGET
integrated database retrieval system
