Pangasianodon hypophthalmus (striped catfish): 113529141
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Entry
113529141 CDS
T05759
Symbol
dnm1l
Name
(RefSeq) dynamin-1-like protein isoform X1
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04217
Necroptosis
phyp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
113529141 (dnm1l)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
113529141 (dnm1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113529141 (dnm1l)
03029 Mitochondrial biogenesis [BR:
phyp03029
]
113529141 (dnm1l)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113529141 (dnm1l)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
113529141 (dnm1l)
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
113529141 (dnm1l)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
113529141 (dnm1l)
RhoA-dependent endocytosis
113529141 (dnm1l)
Mitochondrial biogenesis [BR:
phyp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
113529141 (dnm1l)
Retention of mitochondria
113529141 (dnm1l)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113529141 (dnm1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
AAA_16
FtsK_SpoIIIE
ZFYVE21_C
Motif
Other DBs
NCBI-GeneID:
113529141
NCBI-ProteinID:
XP_026773925
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MEALIPVINKLQDVFNTVGADIIQLPQIAVVGTQSSGKSSVLESLVGRDLLPRGTGIVTR
RPLILQLVHVDPEDRRKTSEENGVEGEEWGKFLHTKNKIYTDFDEIRQEIEAETERISGI
NKGISSEPIHLKIFSPHVVNLTLVDLPGITKVPVGDQPKDIEVQIRELILQYISNPNCII
LAVTAANTDMATSEALKVAREVDPDGRRTLAVVTKLDLMDAGTDAMDVLMGRVIPVKLGL
IGVVNRSQLDINNKKSVADAIRDEYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCL
PELKTRINVLAAQYQSLLSSYGEPVEDKSATLLQLITKFAAEYCNTIEGTAKYIETAELC
GGARICYIFHETFGRTLESVDPLGGLTTIDVLTAIRNATGPRPALFVPEVSFELLVKRQV
KRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTSLLRKRLPVTNE
MVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRMRDLPSAVPRDKTLKGPGGQCL
PPSDQASTEGDMAKGAITQGDQETGTGTWRGMLKKGEEGQPDDKLKQQGPLPASPQKGHA
VNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDSL
QSELVGQLYKSGLLDELLTESEDMAQRRKEAADMLQALQKASQVIAEIRETHLW
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcttattcccgtcattaacaagctgcaggatgtgtttaacaccgtgggcgcg
gatatcattcagctgccgcagatcgctgtggtcgggacgcagagcagtgggaaaagctcc
gtgttggagagtctggttggcagagacctcttgcctcgcggtactggcatcgtgacgcgc
aggccgctcatcctgcagctggtgcacgtggacccagaggaccggagaaagacgagtgag
gagaatggtgtggagggtgaagaatggggtaaatttctacacaccaaaaataagatttac
acagattttgatgaaatcaggcaagaaattgaagctgaaacagaacgaatttctggcatc
aacaagggcatcagcagtgagccgatccacctgaagatcttctctcctcatgtggtgaac
ctcacgttggtggatctgcctggtatcacaaaggttcctgttggtgaccagcccaaagac
attgaggtccaaatccgtgagctgatcctgcagtacattagcaacccaaactgcattata
ttagctgttacagctgccaacacagacatggccacgtctgaggccctcaaagtggctcgt
gaggtcgaccccgatggccgaaggacactggctgtggtgacaaaactggatctgatggat
gctggcacagacgccatggacgtactcatgggcagagtcattcctgttaaactgggactc
ataggagtcgtcaataggagtcagcttgatatcaacaacaagaaatcagtggctgatgca
atccgtgacgagtatgccttcctccagaagaaatatccttccttagctaacagaaacgga
accaaatacctggccagaacgttgaataggttgttgatgcaccacattcgggattgtctg
ccagagctgaagacacgtatcaacgtccttgccgctcagtaccagtctctgctcagcagc
tacggagagcctgtggaggacaagagcgccaccctgttgcagctcatcaccaagttcgcc
gcagagtactgcaacactatcgagggaacagccaaatacatcgagactgctgaactgtgt
ggtggtgccaggatttgctatattttccatgaaacctttggtaggacactggagtcggtc
gatcctcttggtggacttacgaccatagatgtgctcacagccatcagaaatgccacgggt
ccacgtcctgctctgtttgtgcctgaggtgtcgtttgagctgctggtgaagagacaggtg
aagcgtttggaggagcccagcctgcggtgtgtggagctcgtacatgaagagatgcagcga
atcatccagcactgcagtaactacagcacccaggagttgctgcgctttccaaagctccac
gatgccatagtagaagtagtcacgtctctcctgaggaaaagacttcctgtcactaatgag
atggttcacaacttagtagctatcgagttggcgtacatcaacaccaaacatccagacttt
gctgatgcctgtggactcatgaacaacaacatagaggaacagaggcgtaacagaatgaga
gacctcccctcggctgtaccgcgagacaagactctgaagggtcccggtggccagtgtctg
ccccccagcgatcaggcctcaactgagggcgatatggctaagggcgccattactcagggt
gatcaggaaacaggcacagggacctggagaggcatgctgaaaaaaggagaagagggtcag
ccagatgataagttgaagcagcagggtcctctgccagccagccctcagaaaggccatgca
gtcaacctactagatgtgcctgtaccggttgccaggaaactctcggctcgtgagcagagg
gactgtgaggtcatagagagactcattaagtcctacttcctcatcgtacgcaagaacata
caggacagtgtgccaaaggcagtgatgcactttctggtgaaccatgtgaaggacagtctg
cagagtgagctggtaggacagctgtataaatcgggcctgctggacgaactgctcactgag
tcagaggacatggcgcagcgccgcaaggaggccgcagacatgctgcaggccttacagaaa
gccagtcaggtcattgctgagatccgggagacgcacctatggtga
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