Pangasianodon hypophthalmus (striped catfish): 113529725
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Entry
113529725 CDS
T05759
Symbol
ambra1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04137
Mitophagy - animal
phyp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113529725 (ambra1)
04137 Mitophagy - animal
113529725 (ambra1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113529725 (ambra1)
03029 Mitochondrial biogenesis [BR:
phyp03029
]
113529725 (ambra1)
Membrane trafficking [BR:
phyp04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
113529725 (ambra1)
Mitochondrial biogenesis [BR:
phyp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
113529725 (ambra1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
113529725
NCBI-ProteinID:
XP_026774922
LinkDB
All DBs
Position
Unknown
AA seq
1335 aa
AA seq
DB search
MAVQNRNAVLVLSGRERGARILGSQRLLQQLVEDRTRWMKLQSQKVELPDNPRSTFLLAF
SPDRNLMASTHVNHNIYITDVKTGKCLHSLVGHRRTPWCLTFHPTIPGLVASGCLDGEVR
IWDLHGGSESWFTEGNIAIASLAFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTGSETE
RVRLVRFDPLGHNLLTAIVNPTNQQNDEDSDVPMDSMEMALFRQRSVLRSPPVRRTPILH
NFLHILSSRSSGGTEPREPPPSMPLFQYPGRSELADRPPQQSCTQHLGLGCLCSRCAATS
RNVQSPSALQPTDSVHTHSHSHPQPPNQSRPSSDRPSAFSSVHSSTAGSSLHRGLSSLRT
SMALGGTPEPSARLPGGDWSSSLLGTSSGATLDEAAVGIMGRGIVPPPRTSSSSVGLHSL
HRYPDSSSSSSSPIYTSATEGRGLGLPGTDPRQGRASDGTSSGHHPFYDNSQRNNPASIR
NVLQCNLSRYFMEYERMQDLERAGSSREAGTQGPMQDLLSSNVDSERAGPSHRNSAYAGD
GTSSSNLHHNHHNHPNRCRSCHNLLTFNHDTQRWERSSQASSASAQEGPHWQMPVPAFEV
PSQSSREESHTAEEGQQPMQGHQPMGLVYNQDTGQWERVYQQATANPSTEAAQEALNPDV
PVDNTDEDTLRRRLLESSLFPFSRYDMSGSRDHPIYPDPARLSPAAYYAQRMIQYLSRRE
SIRQRSLQNRLRTLSTSSDNQAGNPSSTPAEGSDADYEDIEEPGDRTRHRMPRNARMSAP
SLGRFVPRRFLLPEYLPYAGIFHERGQSGLATHSSINRVLAGASIGDGQSAVASNIANTT
YRLQWWDFTKFDLPEISNASVNVLVPHCKIYNDASCDISADGQLLAVFIPSSQRGFPDEG
ILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGCYVMVGLASRRILLHPTTDHMVAQVF
RLQQPHGGETSIRMVYNVVYPMAPDQRRHVSINSARWLPEPGMGLAYGTSKGDLVICRPV
DYRNEGDSSTEQNSDPLFTASSSSRTRGVDRTSRSGWRLDRDMGLMSAIGLQPRQPAPSV
TSQGTQTPVVHLQNAETQTERELPSTSAFQTTHAPRHLAETSEVQTASTETLPHSEPPDT
VAHGAASHDPSTHTDSLNTNHGESQSDPAPGEDALSRIRRLMAEGGMTAVVQRERSTTMA
SMGGFGNNIVVSHRIHRGSQTPAGAAQASNPAPSGENSLNTRPNTLLSDTSDNPAPSESH
GGTPLTGIPSRSALPSSGPNAVVLEAPAMEDMMEDSQNEEPDPSSRSGYLANISNNGSNN
NDSSSRNYPDDLYSR
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcagaacaggaatgcagtgttggtcctgtcggggcgagagcgcggagctcgg
attttgggatcccagcggctgctgcagcagcttgtggaggacaggacacgctggatgaaa
ctgcagagtcagaaagtggaactacctgataaccctcgctcaaccttcttgctggccttc
agcccagacaggaacctcatggcttccactcatgtcaatcataacatttacatcacggac
gtgaaaacgggaaagtgcctgcactctctggtgggtcaccgccggaccccatggtgtttg
accttccatccaacaattccaggcttggtggcctcagggtgccttgatggagaagtgcgc
atctgggacctacacggtggtagtgagagctggttcacagaagggaacatagccatcgca
tccctggccttccaccccacagcccagctgctgcttattgccaccaacaacgagctgcac
ttctgggactggagtcgacccgagcccttcgctgtcgtcaagaccggcagcgagaccgag
cgcgtcagacttgtaaggtttgatcctcttggacacaatcttctgacagctatcgtgaac
ccaaccaaccaacagaacgatgaagactctgatgttcccatggacagcatggaaatggct
ctgttccgccagcgttctgtgctccgttcccctcctgttcgccgcactccgattttgcac
aacttcctgcacatcctgtcatctcgctcttctggaggaacagaaccccgcgaacctcct
cccagcatgcctctgtttcagtatcccgggcggagtgagctagcagatcggcctcctcag
cagagctgcactcagcacctgggcctcggttgcctatgcagtcgttgtgctgccacatct
cgaaacgttcagagcccctctgctctgcagcctacagactccgtgcacactcactctcat
tcgcacccacagcctcccaaccaatcacgtccctcctcagacaggccctctgcgtttagc
agcgtgcatagcagcactgcagggagctcgctgcaccgaggcctgtcatctctcagaact
agcatggctttgggtggcactccagagccctcagctcggctgccaggtggtgattggtcc
agtagcttgctgggcaccagttctggagctacactggacgaggcagcagtgggcattatg
ggaagggggatcgtaccccctcccaggaccagctcctcttctgtgggtctgcactccctg
cataggtaccctgacagctcttcctcctcctcttcgcccatctatacgtcggccaccgag
ggccgcggcctaggactgcctggcactgaccccaggcagggcagagccagtgacggaacc
agtagtgggcatcaccccttttatgataactcccaacggaacaacccagcttccatccgc
aacgtcctccagtgcaacctgagccgctacttcatggaatacgaacgcatgcaggatctg
gagagagcaggttctagccgggaagcaggcacacaggggcccatgcaggacctgctatcc
agcaacgtagactcagagagagcagggccttcgcatcggaattccgcctatgccggggat
ggcaccagcagttccaacctccaccacaaccaccacaaccaccctaaccgctgccgctca
tgccacaacctcctcacgttcaaccatgacacccagcgttgggagcgttcaagccaagct
tcttctgcctcagctcaggagggcccccactggcagatgcctgtccctgccttcgaggta
ccttcacagagttcgagagaagaatctcataccgcagaagagggccagcagcctatgcag
ggccaccagcctatgggcctggtgtataatcaggacacaggccaatgggagagagtgtat
cagcaggccacagccaatccctccactgaagcagcacaagaagccttaaacccggatgtg
cctgtggacaatactgacgaggacacactccgaaggaggcttttggagtcatcgctcttt
cctttctcccggtatgacatgtccggttcccgtgatcatcctatttacccagatcctgcc
aggttgtctccagcagcatattacgcccagaggatgattcagtatctgtctagaagagaa
agtattcgtcagcgctccttacagaatcgcctgcgcaccctatccacatcctctgacaac
caggcgggcaatccctcctccacacctgcagagggcagtgatgccgactatgaggacata
gaggagcctggagaccggacaagacacagaatgccccgcaatgcacgaatgtctgcaccc
tcccttggtcgcttcgtgccacgaaggttcctgttacctgaatatcttccgtatgctggt
attttccatgagaggggtcagtcgggcctggcgacccactcctcaattaacagagtgtta
gcaggggcttcaattggtgacggccagtctgcagtagccagtaacatcgccaacaccacc
tacagactgcagtggtgggatttcaccaagttcgacctgccagagatcagcaatgcctct
gtgaacgtgctggttccgcactgtaagatctataatgatgctagctgcgacatatcagca
gacgggcagctactggctgtttttatacccagcagccagcggggctttcctgatgagggc
atccttgctgtctactctcttgcccctcacaacttgggagagatgctgtacaccaagcga
ttcggtcccaatgccatctctgtgagcctgtctccaatgggttgctatgtgatggtgggt
ctggcctcgagaaggatcctgctccatcctaccactgaccacatggtggcgcaagtgttc
cgtctgcagcagcctcatggaggagaaacttccatcaggatggtgtataatgtggtgtac
cccatggctccagaccagcgcaggcatgtaagcattaactcggcacgctggctgcctgaa
cctggcatgggtctggcctacgggaccagcaaaggagacctggtcatctgcagacctgtt
gattaccgtaatgagggagacagcagcactgaacagaactcggatcctctattcactgcc
agcagcagcagtcggacccgtggagtggatcggacgagcaggtctggctggcgattggac
agagacatgggactgatgagcgctattggcctgcagccccgtcagcccgccccctcagtg
acctcccagggcacgcagacacctgtggtgcatctacagaatgcagagacacagacagag
agagagctgccctcaacgagtgcgtttcagaccacacacgcaccgcgacacctggcagag
acaagtgaagtgcagactgccagtacagagacactcccacacagtgagccaccagacaca
gtggctcatggagccgcttcccacgatcccagtacccacactgactcactgaacaccaac
cacggtgagtcccagtcggatcctgccccaggtgaagatgctctttcccggatccgacgt
ctgatggctgaaggtgggatgacagcggtggtccagagagagcgcagcaccaccatggcc
tccatgggaggattcggcaacaacatagtggtgagccaccgcattcaccgcggctctcag
acaccagcaggagcagcgcaggcgagtaacccagcaccttcaggggaaaacagcctcaac
acgagaccaaacacgctcctctctgacacttcagacaatcctgctccttctgagtctcat
ggtggtactcctctaactggaatcccctctaggtctgctcttccctcttcaggccctaat
gcagtagtgttagaggccccggccatggaggacatgatggaggacagtcagaacgaagaa
cccgatccatcctctaggagtgggtacttggccaacatcagtaacaacggcagcaacaac
aatgacagtagcagcagaaattaccccgatgacctgtacagcagatag
DBGET
integrated database retrieval system