Pangasianodon hypophthalmus (striped catfish): 113536231
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Entry
113536231 CDS
T05759
Symbol
gdf6
Name
(RefSeq) growth/differentiation factor 6
KO
K20012
growth differentiation factor 6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04060
Cytokine-cytokine receptor interaction
phyp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113536231 (gdf6)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
113536231 (gdf6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
phyp04052
]
113536231 (gdf6)
Cytokines and neuropeptides [BR:
phyp04052
]
Cytokines
Transforming growth factors (RSTK binding)
113536231 (gdf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
113536231
NCBI-ProteinID:
XP_026785872
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MHGRTSAGVFSPLLFLLQSCACVHPAAGELRPGASLPTSPASFSHTLASSSTKRFPRASK
ASVEPHEYMLSIYKTFSAAEKLGLNASFFRSSKAANTITSFVDNGQDDSPNSPLWTQKYL
FDISTLSDKVELLGAELRIYTKVSGHFPTSDAGPMEIRLLSCQTHKLLDSKILDLQDSHK
PRWEVLDVWEIFAERHLHTQRNFFCLELKVSLDKPEREIDLRHLGFHRYGRTQQKKAILV
VFTKSKKRQSLYYEKKGKIKLDPDQAGKEKVPRIKPQRKRRTAVNNRHGKRQGRKSKSRC
SKKPLHVNFKELGWDDWIIAPLDYEAYHCEGICDFPLRSHLEPTNHAIIQTLMNSMNPSN
MPPSCCVPSKLSPISILYIDAGNNVVYKQYEDMVVESCGCR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcacggccgcacttcagcgggtgtattctcgcccctgctcttcctgctgcagtcctgc
gcgtgcgttcacccggcggccggggagctgcgccccggtgccagtcttcccacatcaccg
gcctcgttttcacacacactcgcctcatccagcaccaagcgcttccccagagcaagcaaa
gcctccgtagagcctcacgagtacatgctttccatctataagactttctcggctgctgag
aaactgggactgaacgcgagcttcttccgctcgtctaaagccgcaaacaccatcacgagt
tttgtggataacggacaagatgattctccaaactctccactatggacacagaagtatctc
tttgatatctcaacactttctgataaagttgagctgctgggtgccgaactaagaatctac
acaaaagtctctggacacttcccaacatctgacgcaggtcccatggagattcggcttctt
tcctgccagactcacaaacttctggattccaaaatcttagacttacaggattctcacaaa
ccaagatgggaagtcctagatgtgtgggaaatttttgcagaaaggcatttgcacacacaa
aggaacttcttctgtctggagctcaaggtttccctcgacaagcctgagagggaaatcgac
ttacggcatcttggatttcacagatacgggcgcacacaacagaagaaagccatattggtg
gtgttcaccaagtcaaagaagaggcagagcttgtactatgagaaaaaagggaagattaaa
ttggatcctgaccaggctggaaaggagaaagtccctcgcataaaacctcagcggaagcga
cggacagcggtaaataaccgtcacggcaaacgacagggcagaaagtccaagtctaggtgc
agcaagaagccactgcatgtcaatttcaaagagctgggctgggatgactggattatcgct
cctttggattatgaggcataccattgtgagggaatctgtgactttccacttaggtctcat
ttggagcccactaatcatgccatcatacagactttgatgaactctatgaaccccagcaac
atgccacccagctgctgtgtgccttctaaacttagtcctatcagcatcttgtacattgat
gctgggaataatgtagtgtacaaacaatatgaggacatggtggtggagtcatgtggatgc
aggtga
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