Pangasianodon hypophthalmus (striped catfish): 113537171
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Entry
113537171 CDS
T05759
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113537171 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113537171 (ppil2)
03110 Chaperones and folding catalysts [BR:
phyp03110
]
113537171 (ppil2)
04121 Ubiquitin system [BR:
phyp04121
]
113537171 (ppil2)
Enzymes [BR:
phyp01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
113537171 (ppil2)
Spliceosome [BR:
phyp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113537171 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
113537171 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
113537171 (ppil2)
Chaperones and folding catalysts [BR:
phyp03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
113537171 (ppil2)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
U-box type E3
113537171 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
DUF483
Motif
Other DBs
NCBI-GeneID:
113537171
NCBI-ProteinID:
XP_026787329
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTNFYGGKKAEIPQANFRRLPFDHCSLSLQPFEYPMCTEEGVV
FDLMSIVPWIKKFGTNPISGEKLEAKSLIKLNFSKNSEGKYHCPVLYSVFTNNSHIVANK
VTGNVFSYEAVEQLNFKTKSYKDLLTDEPFTRRDIITLQDPTNLDKFNVSDFFHVKNNMK
VLDPDEEKAKQDPAYHLKSTNLETRETLAELYKEYKGDELLASTMKEPEAKKTDKFNAAH
YSTGRVSASFTSTAMTPATIHEAGAESLNRVFWLFTKKKFYLSVESQINIKCFFFQVPKA
GENFIKLCKKGYYDGTIFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFKPNLSHTGR
GVLSMANSGPNTNKSQFFITFRSCTYLDRKHTVFGRVVGGFETLTAMENVESDPKTDKPK
VLAPSLFFPSSLKCSRLWKIAAEREKEVQKQEEERAQTSASLGKAKTEQEPKTYRPGVGK
YINMATTKRSAADEDSKPSSSETAAKKPKGRTGFGDFSSW
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacgacagcaccaaaaagataagatgtacatcacctgtgcagagtacactaat
ttctatggagggaagaaggcagaaattccccaggccaatttcaggagattgccctttgac
cattgcagtttgtctcttcagccgtttgagtatccgatgtgcactgaagaaggtgtggtg
tttgacctcatgagcatagttccctggattaagaagtttggaacgaaccccatctcagga
gagaaactcgaggccaagtccctcatcaagctcaacttcagcaagaacagcgaaggaaag
taccactgccccgttctgtacagcgtcttcactaacaactcgcacatcgtagccaacaaa
gtcactggcaacgtcttctcttacgaggctgtagagcagctcaacttcaagacaaagagt
tacaaagatctgctgactgatgagccgtttactcgccgggatatcatcacgttgcaggac
ccaaccaatttggataaattcaacgtctcagattttttccatgtgaaaaacaacatgaaa
gttttggatccagacgaggagaaagcaaagcaggacccggcgtatcacctgaagagcacg
aacctggagacacgcgagactctggccgagctctataaggagtataagggtgatgagctg
ctggcttctaccatgaaggagcccgaggccaagaaaaccgacaaattcaatgcggctcat
tactccacaggtcgagtgtctgcctccttcacctccactgctatgactccagccaccata
catgaagcaggggcagaaagtttgaaccgggtattttggttgtttactaaaaaaaaattt
tatctttcagtggaatcccaaataaatattaaatgtttcttctttcaggttcccaaagct
ggtgagaacttcataaagctgtgtaagaaaggctactatgatggcaccatctttcaccgc
tccattagaaacttcatgattcagggaggagacccgacaggcactggtacaggtggtgag
tcgttctggggtaagccatttaaggatgagttcaagcccaatttgtcacacaccggccgt
ggcgtgctcagcatggccaactctgggcccaacaccaacaaatctcagttctttataact
ttcaggtcgtgcacatacctggaccgaaaacacaccgtatttggcagagtggtgggtgga
tttgagaccctcacagccatggagaacgtggagagcgaccctaaaacagataaacccaag
gtacttgcaccatcccttttctttccttcatcactcaaatgttcacgtctctggaaaatt
gcagctgagcgggagaaggaggttcagaagcaggaggaagaaagagcccaaacctcagca
tcgctcggcaaagctaaaactgaacaagagcccaaaacttaccgacccggggtgggcaaa
tatatcaacatggctaccactaagcgctcagcagccgacgaggacagcaaaccatccagc
agtgaaacagcagctaagaagcctaaaggcaggacaggatttggagacttcagctcctgg
taa
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