Pangasianodon hypophthalmus (striped catfish): 113538223
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Entry
113538223 CDS
T05759
Name
(RefSeq) acetylcholine receptor subunit alpha-like
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
phyp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
113538223
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113538223
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113538223
Ion channels [BR:
phyp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
113538223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7536
Motif
Other DBs
NCBI-GeneID:
113538223
NCBI-ProteinID:
XP_026788938
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MNHAGVSLLTGIFLLLLGLGPGPGQCSPDETRLVKNLFKGYNKVVRPVSHFNDAVVVTVG
LQLIQLISVDEVNQIVTSNVRVKQQWKDVNLKWNPDDYGGIKKIRIPSTDIWKPDLVLYN
NADGDFAIVHETKVLLEHTGLIMWNPPAIFKSYCEIVVVYFPFDLQNCSMKLGIWTYDGN
LVVINQDSDRPDLSNFMESGEWVMKDYRSWKHWVYYACCPNTPYLDITYHFLMLRLPLYF
IVNVIIPCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLI
GKYMLFTMILVIASIIITVIVINTHHRSPSTHTMSPWVRKIFIDTIPNFMFFSSMKRPSQ
ERKDRHPFPPDFDISDISGKPVPTSVTFQSPIIKNPDVQSAIEGVKYIAETMRGDEESNN
AAEEWKFVAMVLDHILLCVFMTVCIIGTIGVFAGRLIELNML
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgccggtgtctctctgcttactgggatttttcttcttctattaggtctaggt
ccaggtccaggtcagtgctctcctgatgagacgagactggtcaagaatctgtttaaaggc
tataacaaggtggttcgacccgtcagccatttcaatgacgctgtggtggtgactgtcggg
ctgcagctcatccagctcatcagtgtggatgaagttaatcagatcgtcaccagtaatgtg
cgtgtcaagcagcaatggaaggatgtgaatctgaagtggaatccagacgactatggagga
atcaagaagattcgaattccctccaccgacatctggaaaccagatttagtgctttataac
aatgctgatggagactttgctattgtgcacgagacaaaggtcttgctggaacacaccggg
ttgatcatgtggaatcctccggccatctttaagagctactgtgagatcgttgtagtttat
ttcccttttgacctgcagaactgcagcatgaagctcggcatatggacctacgatggcaac
ctggttgtcatcaaccaggacagcgaccgtccagatctcagtaacttcatggagagtggc
gagtgggtgatgaaggactaccggagctggaaacactgggtttattatgcgtgttgccca
aacacaccgtatctggacatcacatatcacttcctgatgctgagactgccgctgtacttc
atcgtgaacgtcatcatcccctgcatgctcttctccttcctcacgggccttgtcttctac
ctgcccactgactccggtgagaagatgaccctcagtatctctgtcctgctgtctctcacc
gtgttcctcctggtgatcgttgagctgatcccgtccacctccagtgccgtcccgctcatc
ggcaaatacatgctcttcaccatgatcctcgtcatcgcctccatcatcatcaccgtcatc
gtcatcaatacgcaccaccgctctcccagcacgcataccatgtctccctgggtccgcaag
atcttcatcgataccattccgaacttcatgttcttctcctccatgaagcggccatctcag
gagcggaaagacaggcacccttttccccccgactttgacatctcagacatctctggaaaa
cccgtgcccacttccgtcactttccagtcgcccatcatcaaaaacccagatgtgcagagc
gccattgagggcgtcaagtacatcgctgagaccatgaggggtgacgaagagtccaacaac
gctgctgaggaatggaagtttgtggccatggtgctggatcacattctgctctgcgtgttc
atgaccgtgtgtatcatcggcacgatcggagtcttcgccggacgcctcatagagctgaac
atgctctaa
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