Pangasianodon hypophthalmus (striped catfish): 113539079
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Entry
113539079 CDS
T05759
Symbol
mindy4b
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113539079 (mindy4b)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113539079 (mindy4b)
Ubiquitin system [BR:
phyp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
113539079 (mindy4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
113539079
NCBI-ProteinID:
XP_026790436
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MTSSRRCVVPSDGNYGSFQYTDAVSFKPIFLWEKKAQASSSNNGLTETFMELPALATMEN
GLEKASDKNTDLDDILSQIAELDKWREIFDARGLELQDCFEKRPLERLKAEEETEDVSRS
PSSHSFHSNANPLMVPYSIPRALVVSPSLGGHPVSPELAMSLRKILFGNTFHIFNYEWKK
SFFKFREPYSNLSYALEAERGGARAIQMAVQAHIIKYLLFSQPLSSECCGTESLLEVGEK
EQERALAAALADILWTAGEERTATVSLVTPDRCFTPHLDYKLDNFTERLQLFTFKEKEDV
TKFIYEHIQCFNEEGSHGVILFLYSLIFSRSITRLQEDLDFSTTHLLQFGLGNFVCRQAL
LNLLLTGRASPNVFNGKLLCDEHGNALDQPLHGVLTRSNVGYLHWSREQAEHASLPAVGS
MLKTPKLPVWVCNINGTYSVLFSPNRSLLSDWKMEHLFHLYFYNGQPTQVNTAMLTIDTH
SHHWEAKSRDGQGDPEKRFPSVEMTIRTKWEGAAIDWNGTVPFF
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatcgcggcgctgcgttgttcctagtgatgggaattacggctcttttcagtat
actgatgcagtttcctttaaacctatcttcctctgggagaaaaaagctcaggcttcctcc
agcaacaatggcctcactgaaacattcatggagcttcctgcgctcgcaacaatggaaaac
gggcttgagaaggccagtgacaagaacacagacctggatgacattctgagtcagatagca
gagctggacaaatggagagaaatatttgatgctcgggggttggaactacaagactgtttt
gaaaaaagacctcttgagaggcttaaagctgaggaagaaaccgaggatgtttcacggtct
ccttcatcccattcattccacagcaatgccaacccgctgatggtgccctactccatccct
cgtgcactagtcgtctctcccagtctgggtggacacccagtttcacctgaacttgccatg
agtctgaggaagattttgtttggaaacacattccacatcttcaattatgagtggaagaaa
tccttctttaagttccgggagccatattcaaacctgtcctatgctttggaggcagaaaga
gggggagcccgtgccattcagatggcagtccaggcccacattatcaaatacctgcttttc
tcacagccattgagctcagagtgctgtggaacagagagtctgttggaggttggggagaaa
gagcaggagagggctttggctgctgctttggctgatattttatggacagctggtgaggaa
cgtactgccaccgtctccttggttacgccagatcgctgcttcaccccccacctggactac
aaactggacaacttcacagagcggttgcagcttttcacctttaaagagaaagaagacgtg
acaaaatttatatatgaacatattcagtgtttcaatgaggagggaagccatggagtcatt
ctctttctgtatagcttgatcttctcaaggtcgattactagactgcaagaagacctggat
ttcagcacgactcatctcttacaatttggcttgggcaactttgtttgtcgccaggctctt
ttaaacctgttgttgaccggccgtgccagtcctaacgtcttcaacgggaagttgttgtgt
gatgagcatggcaacgcacttgaccaacctctccatggagttctgactcggagcaatgtg
ggatacctacactggagccgagagcaagcagaacatgcaagtctgcctgctgtgggaagc
atgttgaagacacccaaactgcctgtttgggtttgcaacatcaatggcacctacagcgtt
ttatttagtccaaaccgatctctgctgtctgactggaagatggagcacctcttccacctc
tacttctacaatggccaaccaacccaagtcaatactgcaatgctcaccatagacacacat
tctcatcactgggaggctaaaagcagagatggtcaaggagaccctgagaagaggttcccc
tctgtggagatgaccatcaggactaaatgggagggagcggcaattgactggaatgggaca
gtacctttcttctaa
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