KEGG   Pangasianodon hypophthalmus (striped catfish): 113540076
Entry
113540076         CDS       T05759                                 
Name
(RefSeq) laminin subunit alpha-3-like isoform X1
  KO
K06240  laminin, alpha 3/5
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04382  Cornified envelope formation
phyp04510  Focal adhesion
phyp04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113540076
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113540076
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    113540076
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 Laminin_I Laminin_II EGF_LMN_ATRN EGF_laminin Laminin_G_3 CCDC39
Other DBs
NCBI-GeneID: 113540076
NCBI-ProteinID: XP_026792120
LinkDB
Position
Unknown
AA seq 1703 aa
MAGRMSYIWILLLCSLAGSGLCLVDQPSKVQVENNQEHPILRSRKYCDPTNNNHTGGAIE
DCGPGQYRARRGPYRGQCVPCNCNGFSHECDQNTGKCLNCQLNTAGDHCEHCAEGHYGIA
ALRTCRLCPCPFSQPSHSFAIGCLEVGGHVECLCKAGYSGTHCERCAIGYYGDPLAGRSC
QLCDCNHGYICDPITGKCESPDEPSTDNDCQECDSCFQTLMDALEAMDDELAILKAQLKF
QRNISISLTALRILEDDIIATKELVKNYRESVRVLKHGVSELEADMDGVRKDVMKLKIKA
DQTSLTSKDLLRDLNKTHQKGQNLLTDTEELLKRIQEFLEQLRISNGIDSTLSGKLLSGI
LEEAQRMVEQMRKQNCKVQRKLAENELWEAQKLLDYIKNNLTSPLDSAQATAERIAQDLM
SWNTGLKELEEALKQAAKAVNKTILMNVGNEEVLSDIMNHHFMFENKQDDIWSDLAMIRG
TLRDTEDLQNMMNNLKNVYAKLAAELDGAKSQLNQRLVELSKATAMDVIVRKAEEHAQEL
MDLAMHFQMSLLSFTNTSVVHKAIDVITAFEDIINAIKEAEAAANKANKAADHALADVKA
QDLTKKAEELKNSANSLDDKAKEAENNLKEAAEKYDTIKERLDKAKGKKRDMQKEIQTLE
DELNVINRDHIGALLKQAKDAVQAANKTVNNDTARLRNISEELDKIKIPSGESNVDNILN
SVNKTLDELNKFFPNLTDTLAEVENQSSRLPSSANMSASIMRIKDMIERTRELANTIRGP
ILLSGESHIELRPPKNLVDLQAFTAMDLMLRRPKKDGKGRRSRRQSGEEENLFVLYLGNK
NMKRDFIGMVVMDGVLYCVYKLGDMTYKIKTEKITRSSIDSSFMDRVDFRRIYQDAEVIY
TQHYSSSVPKKLSKITNQPNTTVNLLDLGSDEVVFYVGGYPDDFTPPLELQYPKFKGCIE
FITLNAHILSLYNFQHAVNIKNTDQCLRGETREVTKYFDGTGYGKISVISSRSVRFFVLS
RQENALLLFMGNEDSHFTITIERGYVVLRHTENGQKQIKRSDKKVFPVAYFRNIKILHSL
DKTEIIVVDYSVNIVINYNIYNQAFIGGIPAALTERLNINHPALRGCLKGLEVDVAIKFS
EAIGIHAGCPQALLGVHEVTLETGSSLALTANSTLPNSATMVSLGFRSTQSTGVLLHTRD
ADSGFELSLVDGHVEMKDSTTNLKSKNRYDEGRWHYVTAYRNSTGMELNVDNFDRGDVQT
MSTGSIVQNTDVILGKETFKGCMRNFYMRRIENRCIPIDLSNFTQTGNVSFGSCNTQQQP
LSIMARSSLRRKGHVKSNIRKKDCSQPVGHILAYHLSARSQLQYILSPEDLNYRPHIFLD
IRTRSADGLLLHITDKQGFARVILFMSGGRVKLFVGDGTLIYYQKKINNGAWHNIRFSVE
QHVTHLVVDGFRVPDGQLQKDEGISMELQPPVYFGAGKIQPITDTQGIRFPQKSVIGCIR
NVRFNNVLIGEPAVNHGGAPCFDGVVEEGAYFAGGGSHIILEKHFRLGAEFNLTFEVRPR
NMTGLLFHCRGHQDHSLSVFLKKGTMVVQMNDGAGDYSTSLTPPLPLCAESFHRVTVTKK
GNVIQLKMGHKSTSAVGPHVHSPSKTRHTLYIGGVPETKRKRVPVWSSYLGCLRNVQINQ
AALSFKSVSSVFGSVNVNECPAE
NT seq 5112 nt   +upstreamnt  +downstreamnt
atggcaggtaggatgagctatatatggatcctgctgctctgcagtttggccggatcagga
ctctgtctcgtggaccaacccagtaaggtacaggtggagaacaaccaagaacatccaata
cttcgttctagaaaatattgtgatcctacaaacaacaaccacactggaggggctatagag
gactgtggccctggacagtacagggcgagacggggaccatacagaggacagtgtgtcccc
tgtaattgcaatggtttctcccatgagtgtgaccaaaacacagggaaatgcttgaactgc
cagttgaacacagcaggggatcactgtgagcactgtgctgagggacactatggcatcgct
gctctcaggacctgccgactgtgtccatgtcccttctcacaaccgtctcacagttttgcc
attggttgtctggaggttggaggtcatgttgaatgcctgtgcaaggctggttattctgga
acccactgtgaaaggtgtgccattgggtattacggtgacccgctagctggaaggagttgt
cagctctgtgactgcaatcatggatacatctgtgaccccattacaggcaaatgtgaatct
ccagatgagccaagtactgataatgactgccaagagtgtgatagttgctttcagacatta
atggatgctttagaggcaatggatgatgagctcgccatcctcaaggcccaactcaagttt
cagagaaacatctccataagtcttactgctctgagaatactagaagatgacattattgct
acaaaggagctagtaaaaaattacagagaatctgttcgagtgctaaagcatggtgttagc
gaacttgaggcagacatggatggtgtcagaaaagacgtgatgaaacttaagattaaggca
gatcaaacttctttaaccagtaaggatttattaagggatttgaacaaaacacaccaaaag
ggccaaaacctgctcactgatactgaagaacttttaaaaagaatacaagaattcctggaa
caactgaggatttcaaacggtatcgactccactctgtccggcaagttgctgtcaggcata
ctggaggaggcgcaacggatggtggaacagatgcgaaagcaaaattgtaaggtgcagagg
aagctggctgagaatgagctctgggaagcccaaaaactcttagactacatcaagaacaat
ctcaccagtcccttggatagtgcccaggctactgctgaacgaattgctcaagacctgatg
tcctggaatactggacttaaagagctagaggaagcactgaaacaggcagcgaaagctgta
aacaaaacaattctcatgaatgttggtaatgaagaagttctgtcagatattatgaatcat
catttcatgtttgagaacaagcaggatgacatctggtctgatctggcaatgattagagga
acactgagagacacggaggatcttcagaacatgatgaacaatctaaaaaatgtttatgca
aaacttgcagctgaactggatggagcaaagtcacagctgaaccagaggcttgttgagctt
tctaaagccacggccatggacgttatcgtcagaaaggcagaggagcatgcacaggagctc
atggatcttgcgatgcattttcaaatgtctcttctaagtttcaccaacacttcagttgtt
cataaagccatagatgtgatcactgcttttgaagacattattaacgctatcaaagaagcc
gaggcagcagctaataaagccaacaaagctgcagatcatgccttagcggatgtaaaagca
caagacctgaccaaaaaggcagaagaactaaagaattctgcaaacagcctggatgacaaa
gctaaggaagcagaaaataatctaaaagaggctgcagaaaagtatgataccattaaagaa
cgcctggacaaagcaaagggcaaaaaaagggatatgcagaaagagatccaaactcttgag
gatgagctaaatgtaatcaaccgagatcatataggtgcccttctgaaacaagctaaggat
gctgtgcaggctgccaacaaaacagtcaacaatgatacagcacgtttaaggaacattagt
gaggagttggacaagatcaaaatacccagcggtgaatcaaatgtggacaacatactcaac
agcgtcaacaaaacattggatgaactgaacaaattcttccccaacctgactgatactctg
gctgaagtggagaatcagagcagccggctgcccagcagtgccaacatgtctgctagcatt
atgagaatcaaagacatgattgagaggaccagagaactggccaacacaattaggggaccc
atcttattatctggggaaagccacatagagctgcgtcctcctaaaaacctggttgatcta
caagccttcactgccatggacctgatgctccgtcggcccaaaaaagatgggaaaggcagg
cgcagccgacgccagagtggagaggaagaaaatctattcgtcctttacttaggaaacaag
aatatgaagagagactttattggaatggtggtcatggatggtgtcctgtattgtgtgtac
aaactgggggacatgacctacaaaataaagactgaaaaaattacccggtccagcattgac
agctcctttatggacagagtggacttccgtagaatttaccaagatgcagaagtcatctat
acccagcattacagctcaagtgttcccaagaagctgtcaaaaatcacaaatcaaccaaat
acaactgtaaacttgctggatctgggcagtgatgaggttgttttctatgtgggaggctat
ccagatgacttcactccaccactggagctccagtatcccaaatttaagggatgcattgag
tttatcacattaaatgcacacatcctcagcctatacaacttccagcatgctgtcaacatt
aaaaatacagaccaatgtctaagaggcgagacccgagaggtgacaaaatactttgatggt
acaggttatggcaagatcagtgtgatcagcagtagatccgtcaggttctttgttctaagt
cgacaagagaatgccttgctgctttttatggggaatgaggactctcacttcactattact
attgaaagaggctatgttgttttgcggcacacagagaatggccaaaagcaaattaagagg
agtgacaaaaaagtttttcctgtggcctattttcggaacattaaaatcctccattcactc
gacaaaactgagataatcgttgtagactattcggtcaatattgtgatcaactacaacatc
tataatcaagcatttataggaggaatcccagcagcgctcacagagagactaaatattaac
cacccggcgcttagaggatgtcttaaagggcttgaggtggatgttgccatcaaattctca
gaggcaattggaattcatgctggttgtccgcaggctttactgggtgtacatgaagttact
ctggagacaggaagctctcttgctcttactgctaacagtacattgccaaattcagccaca
atggtttccctgggcttcagatccacacagagcactggtgtcttactgcacaccagggac
gcggacagtggatttgaactgtctctcgttgatggacatgtcgagatgaaagacagtaca
accaatttaaagtccaaaaacagatacgatgagggaaggtggcactatgtgacggcttat
agaaacagcacaggaatggagctaaatgttgacaattttgacagaggagatgtgcagaca
atgtccacaggctctatagtccaaaacactgatgtgattttaggaaaagagacattcaaa
ggctgcatgaggaacttttacatgaggagaattgaaaacagatgcatcccaattgatctg
agcaatttcactcagacgggaaacgtgtcttttgggtcgtgtaacactcagcagcagcct
ctgtccatcatggcaagaagcagtttaagacgaaaagggcatgttaagtccaacatcaga
aagaaagactgtagtcagccagtgggtcacatcctggcctaccatctcagcgcacgcagt
cagctgcagtacatcctatctccagaagaccttaattacaggcctcatattttcctggac
attcggacaaggtcagctgatggcctcctgctccacatcacagataagcaaggctttgct
cgtgtcatcctgttcatgagcggcggcagagtcaaactctttgtcggtgatggaacactg
atctactatcagaagaagattaataatggcgcctggcacaatatcaggttcagtgttgag
cagcacgtcacacacctggtggtggatgggtttcgggtgccggatggacagctgcagaag
gatgaagggatctcgatggagcttcagcctcctgtttattttggagctggaaagattcaa
ccaatcactgacactcagggcatacgtttccctcagaagagcgtgataggatgcatccgc
aacgtcaggtttaacaatgttcttattggagagccagctgtcaatcatggaggagctccc
tgttttgatggggtagttgaggaaggggcgtacttcgctggtggtggctctcacatcatt
ttagagaaacactttaggttgggtgctgagttcaatttaacttttgaagttcgtcccaga
aacatgaccggtttacttttccactgcagaggtcatcaagatcacagcctcagcgttttc
ctgaagaaaggcacaatggtggtccagatgaacgatggtgcgggagactacagcacctct
ctgactcctccactgccgctctgtgcagaatccttccatcgtgtgacagtgaccaaaaaa
ggaaatgttatccagctaaagatgggacacaagtccaccagtgctgttgggcctcatgtg
cattccccttccaagactcgtcacacactttacatcggaggcgtaccagagaccaagcgg
aagagagtgccggtgtggagctcctacctgggatgtctgagaaacgtgcaaataaaccag
gctgctctttcatttaagtctgttagcagtgtgttcggttccgtcaacgttaatgagtgt
ccggcagagtag

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