KEGG   Pangasianodon hypophthalmus (striped catfish): 113541709
Entry
113541709         CDS       T05759                                 
Name
(RefSeq) calpain-1 catalytic subunit-like
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04141  Protein processing in endoplasmic reticulum
phyp04210  Apoptosis
phyp04217  Necroptosis
phyp04218  Cellular senescence
phyp04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113541709
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    113541709
   04217 Necroptosis
    113541709
   04218 Cellular senescence
    113541709
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    113541709
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:phyp01002]
    113541709
Enzymes [BR:phyp01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     113541709
Peptidases and inhibitors [BR:phyp01002]
 Cysteine peptidases
  Family C2: calpain family
   113541709
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_1 EF-hand_8 EF-hand_7 EF-hand_6 EF-hand_5 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 113541709
NCBI-ProteinID: XP_026794640
LinkDB
Position
Unknown
AA seq 704 aa
MEPIYATGVAARLRSEWDRNEGLGQNDRALKFLGQDFESLRASCLQIGRLYEDETFPTQP
SSLGFKELAPGSAKTKGVCWMRPTEFCTDPHFIVDGATRTDICQGALGDCWLLAAIACLT
LNEPLLRRVVPHGQSFHQQYAGIFHFQFWQFGEWVDVVIDDRLPVRDGKLLFVHSAEGAE
FWSALVEKAYAKLNGCYEALSGGCTSEGFEDFTGGVTEMYELKKAPANLFSIIRRAVERG
SLMGCSIDITGFFDMEAVTFKKLVKGHAYSVTGVEEVEFKGNVVKLLRIRNPWGEVEWTG
AWSDNSKEWNGIDPSVRARLHNRYEDGEFWMSYSDFMKEFSRLEICNLTADALQSSELKK
WNSALYPGEWRRGSTAGGCRNYPATFWINPQYKIVLKDPDTEDQDGCSFLVALMQKNRRL
LRREGKDMETIGYAIYEVPKEFLGSTGVHLKRDFFLKHTSSARSELFINLREVSSRFCLP
AGEYIIVPSTFQPHKEGDFVLRVFSEKAADSEELDDELSADVPEEPILQESEIDEGFKAL
FFKLAGKEMEIDTPKLQVILNRVVNKHKDLKTNGFDKEACRSMINLLDTTGKGRLGLTDF
HVLWEKIKRYLNVFREFDLDKSGTMSSYEMRLALESTGFKLTNHIFQLIILRYAKPDMNV
DFDSFVTCLIRLESMFKTFKTMDTDADGVVSFSFSQWISLTMFT
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggagcctatatatgccaccggagtggctgctcgactgaggagtgagtgggatcgcaat
gaaggtcttggtcagaatgatagggctctgaagttcctcggtcaagactttgagtctttg
cgtgccagctgccttcagattggccggttatatgaggacgaaacattcccaacccaacct
tcctcactaggattcaaggagctggcacccggctctgccaaaaccaaaggagtgtgctgg
atgagacccacggagttctgtacagacccacatttcattgtagatggagcaacacgcaca
gacatctgccaaggagctctaggggactgttggctgctggcggccattgcgtgtcttact
ctgaacgagccattgctgcgccgtgtggtacctcatggccagagcttccatcagcaatat
gctggaatctttcacttccagttttggcagtttggggaatgggtggatgtagtgattgat
gaccggctgccagtgagagatgggaagcttctgtttgtccactcagctgaaggggcggag
ttctggagtgcactagtggagaaggcatatgccaagttaaatggttgttacgaggcgctc
tctggaggctgcacctctgaggggtttgaggattttactggcggtgttacagaaatgtat
gaactaaagaaagctccagctaacctcttcagcatcatccgaagagctgtagaaagagga
tctctgatgggctgctctatagatatcacaggtttctttgacatggaggcagtcaccttc
aaaaagctggtgaaaggccatgcttattctgttacaggagtggaggaggtggaatttaaa
ggaaacgttgtaaagttgcttcgcatccggaacccctggggagaggtggaatggactgga
gcctggagtgacaattccaaggagtggaatgggattgacccttccgtaagggcccgtctg
cataaccgctatgaagatggcgagttctggatgtcatatagtgatttcatgaaggagttc
agcagattggagatctgtaatctaacagcagatgcactgcaaagcagtgagctgaagaag
tggaattcggccctgtacccaggagagtggaggagaggcagcacggctggaggctgcagg
aactaccccgcaactttttggatcaacccccagtataaaatcgtgctaaaggacccagac
actgaggaccaagatggctgcagttttctggtggcactcatgcagaagaatcggcggctg
ttacgacgagagggcaaagacatggaaacgattggatatgccatttatgaggttcccaaa
gagtttctgggcagcacaggtgtgcatctgaagcgtgacttcttcctcaagcacacgtcc
agcgctcgctccgagctgttcatcaaccttcgggaggtgagctcacgcttctgtctgcct
gcaggggagtacatcatcgttccctccaccttccagccacacaaagagggcgattttgtg
ttgagggttttctctgaaaaagccgcagactccgaggaacttgatgatgagctttctgca
gatgtaccagaagagcccatactacaggaaagtgagattgatgaaggattcaaagctctt
ttcttcaagctggctggaaaggaaatggagattgatacaccaaagctgcaggtgattctg
aaccgcgttgtaaacaaacacaaggacttaaaaacaaatggctttgacaaggaggcctgc
agaagcatgattaatctcctggatacaactggcaaaggaaggttgggtttaacagatttt
catgtgctttgggagaagattaaacgatatcttaatgtgtttagagaatttgacttggac
aagtcgggcaccatgagctcctatgaaatgcgcctggctttagaatccacaggtttcaag
ctgacgaaccacattttccagttaataatcctgcgttatgctaagccagacatgaatgtg
gacttcgacagtttcgtaacttgtctgatccgcctggagagcatgttcaaaacatttaaa
accatggacacagatgcagatggagtggtgtccttcagtttctcccagtggatctccctt
accatgtttacatag

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